Mercurial > repos > aac > irp_integration
comparison irp-gateway.xml @ 0:a1267fc353f4 draft
"planemo upload commit 14444c0cf01771bee10424a169ab24954530350d-dirty"
| author | aac |
|---|---|
| date | Mon, 11 Jan 2021 14:46:35 +0000 |
| parents | |
| children | b25bbb79cfbf |
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| -1:000000000000 | 0:a1267fc353f4 |
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| 1 <?xml version="1.0"?> | |
| 2 <!-- | |
| 3 If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in | |
| 4 the initial response. If value of 'URL_method' is 'post', any additional params coming back in the | |
| 5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed. | |
| 6 --> | |
| 7 <tool name="iReceptor Plus Gateway" id="irp-integration" tool_type="data_source" version="1.0.0"> | |
| 8 <description>Access the iReceptor Plus Gateway to browse AIRR-seq data.</description> | |
| 9 <command><![CDATA[ | |
| 10 python data_source.py '$output' $__app__.config.output_size_limit | |
| 11 ]]></command> | |
| 12 <inputs action="https://gateway.ireceptor.org/downloads" check_values="false" method="post"> | |
| 13 <display>Redirected to $GALAXY_URL</display> | |
| 14 <param name="GALAXY_URL" type="baseurl" value="/tool_runner" /> | |
| 15 <param name="tool_id" type="hidden" value="irp-integration" /> | |
| 16 <param name="sendToGalaxy" type="hidden" value="1" /> | |
| 17 </inputs> | |
| 18 <request_param_translation> | |
| 19 <request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" /> | |
| 20 <request_param galaxy_name="URL" remote_name="URL" missing="" /> | |
| 21 <request_param galaxy_name="data_type" remote_name="outputType" missing="auto" > | |
| 22 <value_translation> | |
| 23 <value galaxy_value="tabular" remote_value="table" /> | |
| 24 </value_translation> | |
| 25 </request_param> | |
| 26 </request_param_translation> | |
| 27 <outputs> | |
| 28 <data name="output" format="tabular" label="${tool.name}"/> | |
| 29 </outputs> | |
| 30 <options sanitize="False" refresh="True"/> | |
| 31 </tool> |