Mercurial > repos > aaronpetkau > flash
comparison README_ASSEMBLY_STATS @ 0:44c401ebc424 draft
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| author | aaronpetkau |
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| date | Sat, 04 Jul 2015 08:57:35 -0400 |
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| -1:000000000000 | 0:44c401ebc424 |
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| 1 #Created 07/01/2011 | |
| 2 #Konrad Paszkiewicz, University of Exeter | |
| 3 | |
| 4 Assembly stats | |
| 5 | |
| 6 This series of scripts calculates various metrics on an input FASTA file. Typically this is most useful on either denovo genomic or transcriptomic data. | |
| 7 | |
| 8 Prerequisites: | |
| 9 | |
| 10 1. The bundled perl script fasta_summary.pl | |
| 11 | |
| 12 Limitations: | |
| 13 | |
| 14 Ideally this should output a composite dataset of some sort |