Mercurial > repos > abaizan > kodoja
diff kodoja_search.xml @ 1:4554fcd4ef6d draft
v0.0.6
author | peterjc |
---|---|
date | Wed, 05 Sep 2018 10:44:57 -0400 |
parents | 18fe33eb7775 |
children | ee917702dbd8 |
line wrap: on
line diff
--- a/kodoja_search.xml Wed Mar 14 12:46:57 2018 -0400 +++ b/kodoja_search.xml Wed Sep 05 10:44:57 2018 -0400 @@ -1,7 +1,7 @@ -<tool id="kodoja_search" name="Kodoja database search" version="0.0.0"> +<tool id="kodoja_search" name="Kodoja database search" version="0.0.6"> <description>identify viruses from plant RNA sequencing data</description> <requirements> - <requirement type="package" version="0.0.3">kodoja</requirement> + <requirement type="package" version="0.0.6">kodoja</requirement> </requirements> <version_command>kodoja_search.py --version</version_command> <command detect_errors="exit_code"><![CDATA[ @@ -53,7 +53,7 @@ </options> </param> <conditional name="single_paired"> - <param name="single_paired_selector" type="select" label="Single or paired reads" help="--paired"> + <param name="single_paired_selector" type="select" label="Single or paired reads"> <!-- TODO? <option value="collection">Collection</option> --> @@ -102,8 +102,8 @@ FASTQ/FASTA sequencing run by matching them against both Kraken and Kaiju databases. -The main output is a five column tab-separated table as follows -(tabular format in Galaxy): +The main output is a tab-separated table as follows (tabular format in Galaxy) +with the following columns: 1. Species name 2. Species NCBI taxonomy identifier (TaxID)