Mercurial > repos > abims-sbr > pairwise

comparison test-data/pairwise.out @ 0:90b57ab0bd1d draft default tip

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planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 3c7982d775b6f3b472f6514d791edcb43cd258a1-dirty
author abims-sbr
date Fri, 01 Feb 2019 10:23:16 -0500
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comparison
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-1:000000000000 0:90b57ab0bd1d
1 Pair of species:
2 ('PfPfiji_Trinity.fasta', 'ApApomp_Trinity.fasta')
3 Pair of species:
4 ('PfPfiji_Trinity.fasta', 'AmAmphi_Trinity.fasta')
5 Pair of species:
6 ('PfPfiji_Trinity.fasta', 'AcAcaud_Trinity.fasta')
7 Pair of species:
8 ('ApApomp_Trinity.fasta', 'AmAmphi_Trinity.fasta')
9 Pair of species:
10 ('ApApomp_Trinity.fasta', 'AcAcaud_Trinity.fasta')
11 Pair of species:
12 ('AmAmphi_Trinity.fasta', 'AcAcaud_Trinity.fasta')
13 -------------------- Pairwise PfPfiji_AmAmphi --------------------
14
15 database : PfPfiji_Trinity.fasta
16 query file : AmAmphi_Trinity.fasta
17
18 ***** RUN FIRST BLAST *****
19
20
21 database : AmAmphi_Trinity.fasta
22 query file : only the sequences of PfPfiji_Trinity.fasta which matched during the last BLAST
23
24 ***** RUN SECOND BLAST *****
25
26
27 Number of pairwises parsed = 2
28
29
30
31 -------------------- Pairwise AmAmphi_AcAcaud --------------------
32
33 database : AmAmphi_Trinity.fasta
34 query file : AcAcaud_Trinity.fasta
35
36 ***** RUN FIRST BLAST *****
37
38
39 database : AcAcaud_Trinity.fasta
40 query file : only the sequences of AmAmphi_Trinity.fasta which matched during the last BLAST
41
42 ***** RUN SECOND BLAST *****
43
44
45 Number of pairwises parsed = 3
46
47
48
49 -------------------- Pairwise ApApomp_AmAmphi --------------------
50
51 database : ApApomp_Trinity.fasta
52 query file : AmAmphi_Trinity.fasta
53
54 ***** RUN FIRST BLAST *****
55
56
57 database : AmAmphi_Trinity.fasta
58 query file : only the sequences of ApApomp_Trinity.fasta which matched during the last BLAST
59
60 ***** RUN SECOND BLAST *****
61
62
63 Number of pairwises parsed = 0
64
65
66
67 -------------------- Pairwise PfPfiji_ApApomp --------------------
68
69 database : PfPfiji_Trinity.fasta
70 query file : ApApomp_Trinity.fasta
71
72 ***** RUN FIRST BLAST *****
73
74
75 database : ApApomp_Trinity.fasta
76 query file : only the sequences of PfPfiji_Trinity.fasta which matched during the last BLAST
77
78 ***** RUN SECOND BLAST *****
79
80
81 Number of pairwises parsed = 5
82
83
84
85 -------------------- Pairwise PfPfiji_AcAcaud --------------------
86
87 database : PfPfiji_Trinity.fasta
88 query file : AcAcaud_Trinity.fasta
89
90 ***** RUN FIRST BLAST *****
91
92
93 database : AcAcaud_Trinity.fasta
94 query file : only the sequences of PfPfiji_Trinity.fasta which matched during the last BLAST
95
96 ***** RUN SECOND BLAST *****
97
98
99 Number of pairwises parsed = 2
100
101
102
103 -------------------- Pairwise ApApomp_AcAcaud --------------------
104
105 database : ApApomp_Trinity.fasta
106 query file : AcAcaud_Trinity.fasta
107
108 ***** RUN FIRST BLAST *****
109
110
111 database : AcAcaud_Trinity.fasta
112 query file : only the sequences of ApApomp_Trinity.fasta which matched during the last BLAST
113
114 ***** RUN SECOND BLAST *****
115
116
117 Number of pairwises parsed = 1
118
119
120