# HG changeset patch
# User alenail
# Date 1460584346 14400
# Node ID a5df36602f21ac3d81ff5a6d1b1244870104033d
# Parent  d9e6a1c66e765026c572ef2b67dd0e769f9fc402
Uploaded

diff -r d9e6a1c66e76 -r a5df36602f21 chipsequtil/map_to_known_genes/._map_to_known_genes.py
Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.py has changed
diff -r d9e6a1c66e76 -r a5df36602f21 chipsequtil/map_to_known_genes/._map_to_known_genes.xml
Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.xml has changed
diff -r d9e6a1c66e76 -r a5df36602f21 chipsequtil/pieplot_macs/pieplots_macs.xml
--- a/chipsequtil/pieplot_macs/pieplots_macs.xml	Wed Apr 13 17:41:53 2016 -0400
+++ b/chipsequtil/pieplot_macs/pieplots_macs.xml	Wed Apr 13 17:52:26 2016 -0400
@@ -8,7 +8,7 @@
     <requirement type="package">pandas</requirement>
   </requirements>
   <command interpreter="python">
-    pieplots_macs.py genefile $genefilepeakfile $peakfile $MACSoutfile $out
+    pieplots_macs.py --genefile $genefile --peakfile $peakfile $MACS --outfile $out
   </command>
   <inputs>
     <param name="genefile" type="data" label="Gene file (map_peaks_to_genes)" help="" optional="false" />