Mercurial > repos > alenail > chipsequtil

changeset 29:5c1e5d771216 draft

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Uploaded
author alenail
date Thu, 14 Apr 2016 09:35:53 -0400
parents aec507b81d10
children af2afdf7b4e0
files chipsequtil/map_to_known_genes/._map_to_known_genes.py chipsequtil/map_to_known_genes/._map_to_known_genes.xml chipsequtil/pieplot_macs/pieplots_macs.py chipsequtil/pieplot_macs/tool_dependencies.xml
diffstat 4 files changed, 7 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.py has changed
Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.xml has changed
--- a/chipsequtil/pieplot_macs/pieplots_macs.py	Wed Apr 13 18:10:35 2016 -0400
+++ b/chipsequtil/pieplot_macs/pieplots_macs.py	Thu Apr 14 09:35:53 2016 -0400
@@ -17,6 +17,7 @@
 __author__='Renan Escalante'
 __email__='renanec@mit.edu'
 
+import pandas as pd
 import matplotlib
 matplotlib.use('pdf')
 from matplotlib import pyplot as plt
@@ -24,7 +25,6 @@
 matplotlib.rcParams['font.size']=14
 import sys
 from argparse import ArgumentParser
-import pandas as pd
 
 def map_peaks(gene,peak,outfile,macsFlag):
     genefile = open(gene, 'r')
--- a/chipsequtil/pieplot_macs/tool_dependencies.xml	Wed Apr 13 18:10:35 2016 -0400
+++ b/chipsequtil/pieplot_macs/tool_dependencies.xml	Thu Apr 14 09:35:53 2016 -0400
@@ -1,9 +1,9 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="pandas" version="0.14.1">
-        <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
-    <package name="matplotlib" version="1.4">
-        <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
+  <package name="pandas" version="0.14.1">
+    <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  </package>
+  <package name="matplotlib" version="1.4">
+    <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+  </package>
 </tool_dependency>