Mercurial > repos > alenail > chipsequtil

changeset 31:9c68f2d9f236 draft

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Uploaded
author alenail
date Thu, 14 Apr 2016 09:44:56 -0400
parents af2afdf7b4e0
children df6cf6d5f766
files chipsequtil/map_to_known_genes/._map_to_known_genes.py chipsequtil/map_to_known_genes/._map_to_known_genes.xml chipsequtil/map_to_known_genes/tool_dependencies.xml chipsequtil/pieplot_macs/tool_dependencies.xml chipsequtil/tool_dependencies.xml
diffstat 5 files changed, 23 insertions(+), 26 deletions(-) [+]
line wrap: on
line diff
Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.py has changed
Binary file chipsequtil/map_to_known_genes/._map_to_known_genes.xml has changed
--- a/chipsequtil/map_to_known_genes/tool_dependencies.xml	Thu Apr 14 09:36:01 2016 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,17 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-    <package name="chipsequtil" version="1.0">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">https://github.com/fraenkel-lab/chipsequtil/archive/master.zip</action>
-                <action type="shell_command">cp org_settings.cfg src/chipsequtil/</action>
-                <action type="shell_command">python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
-                <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
-                    <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme></readme>
-    </package>
-</tool_dependency>
--- a/chipsequtil/pieplot_macs/tool_dependencies.xml	Thu Apr 14 09:36:01 2016 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,9 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-  <package name="pandas" version="0.14.1">
-    <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  </package>
-  <package name="matplotlib" version="1.4">
-    <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
-  </package>
-</tool_dependency>
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/chipsequtil/tool_dependencies.xml	Thu Apr 14 09:44:56 2016 -0400
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="chipsequtil" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://github.com/fraenkel-lab/chipsequtil/archive/master.zip</action>
+                <action type="shell_command">cp org_settings.cfg src/chipsequtil/</action>
+                <action type="shell_command">python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme />
+    </package>
+    <package name="pandas" version="0.14.1">
+        <repository changeset_revision="ac9f317487a9" name="package_pandas_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="matplotlib" version="1.4">
+        <repository changeset_revision="f7424e1cf115" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+</tool_dependency>