Mercurial > repos > althonos > gecco
comparison test-data/BGC0001866.1_cluster_1.gbk @ 14:56b924f62165 draft
"Update tests files for Galaxy tool wrapper"
author | althonos |
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date | Tue, 05 Apr 2022 23:18:49 +0000 |
parents | d64fe390f3c9 |
children | cc91d730cc4f |
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13:fde43648cba0 | 14:56b924f62165 |
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1 LOCUS BGC0001866.1_cluster_1 32633 bp DNA linear UNK 21-NOV-2021 | 1 LOCUS BGC0001866.1_cluster_1 32633 bp DNA linear UNK 06-APR-2022 |
2 DEFINITION BGC0001866.1 Byssochlamys spectabilis strain CBS 101075 chromosome | 2 DEFINITION BGC0001866.1 Byssochlamys spectabilis strain CBS 101075 chromosome |
3 Unknown C8Q69scaffold_14, whole genome shotgun sequence. | 3 Unknown C8Q69scaffold_14, whole genome shotgun sequence. |
4 ACCESSION BGC0001866.1_cluster_1 | 4 ACCESSION BGC0001866.1_cluster_1 |
5 VERSION BGC0001866.1_cluster_1 | 5 VERSION BGC0001866.1_cluster_1 |
6 KEYWORDS . | 6 KEYWORDS . |
13 TITLE Accurate de novo identification of biosynthetic gene clusters with | 13 TITLE Accurate de novo identification of biosynthetic gene clusters with |
14 GECCO | 14 GECCO |
15 JOURNAL bioRxiv (2021.05.03.442509) | 15 JOURNAL bioRxiv (2021.05.03.442509) |
16 REMARK doi:10.1101/2021.05.03.442509 | 16 REMARK doi:10.1101/2021.05.03.442509 |
17 COMMENT ##GECCO-Data-START## | 17 COMMENT ##GECCO-Data-START## |
18 version :: GECCO v0.8.10 | 18 version :: GECCO v0.9.1 |
19 creation_date :: 2021-11-21T16:33:58.470847 | 19 creation_date :: 2022-04-06T01:08:36.965708 |
20 biosyn_class :: Polyketide | 20 biosyn_class :: Polyketide |
21 alkaloid_probability :: 0.0 | 21 alkaloid_probability :: 0.010000000000000009 |
22 polyketide_probability :: 0.98 | 22 polyketide_probability :: 0.96 |
23 ripp_probability :: 0.0 | 23 ripp_probability :: 0.0 |
24 saccharide_probability :: 0.0 | 24 saccharide_probability :: 0.0 |
25 terpene_probability :: 0.0 | 25 terpene_probability :: 0.010000000000000009 |
26 nrp_probability :: 0.09999999999999998 | 26 nrp_probability :: 0.14 |
27 ##GECCO-Data-END## | 27 ##GECCO-Data-END## |
28 FEATURES Location/Qualifiers | 28 FEATURES Location/Qualifiers |
29 CDS complement(1..1143) | 29 CDS complement(1..1143) |
30 /inference="ab initio prediction:Prodigal:2.6" | 30 /inference="ab initio prediction:Prodigal:2.6" |
31 /transl_table=11 | 31 /transl_table=11 |
39 LWRLWQRRMQGTYYVLSQEDERDRFSMDKEAWKSEETKRM*" | 39 LWRLWQRRMQGTYYVLSQEDERDRFSMDKEAWKSEETKRM*" |
40 misc_feature 1..189 | 40 misc_feature 1..189 |
41 /inference="protein motif" | 41 /inference="protein motif" |
42 /db_xref="PFAM:PF00394" | 42 /db_xref="PFAM:PF00394" |
43 /db_xref="InterPro:IPR001117" | 43 /db_xref="InterPro:IPR001117" |
44 /note="e-value: 2.1941888078432915e-08" | 44 /note="e-value: 2.262067179461254e-08" |
45 /note="p-value: 8.178117062405111e-12" | 45 /note="p-value: 8.178117062405111e-12" |
46 /function="Multicopper oxidase" | 46 /function="Multicopper oxidase" |
47 /standard_name="PF00394" | 47 /standard_name="PF00394" |
48 misc_feature 448..843 | 48 misc_feature 448..843 |
49 /inference="protein motif" | 49 /inference="protein motif" |
50 /db_xref="PFAM:PF07731" | 50 /db_xref="PFAM:PF07731" |
51 /db_xref="InterPro:IPR011706" | 51 /db_xref="InterPro:IPR011706" |
52 /note="e-value: 3.9374169295176556e-23" | 52 /note="e-value: 4.059222969454281e-23" |
53 /note="p-value: 1.467542649838858e-26" | 53 /note="p-value: 1.467542649838858e-26" |
54 /function="Multicopper oxidase" | 54 /function="Multicopper oxidase" |
55 /standard_name="PF07731" | 55 /standard_name="PF07731" |
56 CDS 1179..1670 | 56 CDS 1179..1670 |
57 /inference="ab initio prediction:Prodigal:2.6" | 57 /inference="ab initio prediction:Prodigal:2.6" |
91 FNSHEREIDEWKDLIQGVHTGLRVQQVIQPAGSSMAIIEVVRG*" | 91 FNSHEREIDEWKDLIQGVHTGLRVQQVIQPAGSSMAIIEVVRG*" |
92 misc_feature 3648..3962 | 92 misc_feature 3648..3962 |
93 /inference="protein motif" | 93 /inference="protein motif" |
94 /db_xref="PFAM:PF00891" | 94 /db_xref="PFAM:PF00891" |
95 /db_xref="InterPro:IPR001077" | 95 /db_xref="InterPro:IPR001077" |
96 /note="e-value: 4.743887678074703e-16" | 96 /note="e-value: 4.890642309934635e-16" |
97 /note="p-value: 1.7681280946979883e-19" | 97 /note="p-value: 1.7681280946979883e-19" |
98 /function="O-methyltransferase domain" | 98 /function="O-methyltransferase domain" |
99 /standard_name="PF00891" | 99 /standard_name="PF00891" |
100 CDS 4337..4792 | 100 CDS 4337..4792 |
101 /inference="ab initio prediction:Prodigal:2.6" | 101 /inference="ab initio prediction:Prodigal:2.6" |
106 LTNVSEDCLSLRIARPENTKSTAKLPVMVWLYGGAYNRLPTDLQWET*" | 106 LTNVSEDCLSLRIARPENTKSTAKLPVMVWLYGGAYNRLPTDLQWET*" |
107 misc_feature 4478..4756 | 107 misc_feature 4478..4756 |
108 /inference="protein motif" | 108 /inference="protein motif" |
109 /db_xref="PFAM:PF00135" | 109 /db_xref="PFAM:PF00135" |
110 /db_xref="InterPro:IPR002018" | 110 /db_xref="InterPro:IPR002018" |
111 /note="e-value: 4.674605664377319e-21" | 111 /note="e-value: 4.819217021121008e-21" |
112 /note="p-value: 1.7423055029360116e-24" | 112 /note="p-value: 1.7423055029360116e-24" |
113 /function="Carboxylesterase family" | 113 /function="Carboxylesterase family" |
114 /standard_name="PF00135" | 114 /standard_name="PF00135" |
115 CDS 5038..5466 | 115 CDS 5038..5466 |
116 /inference="ab initio prediction:Prodigal:2.6" | 116 /inference="ab initio prediction:Prodigal:2.6" |
121 MEDLVNATFEVAHSVDPVNGFRALYVLLHFPSHKCKQD*" | 121 MEDLVNATFEVAHSVDPVNGFRALYVLLHFPSHKCKQD*" |
122 misc_feature 5041..5379 | 122 misc_feature 5041..5379 |
123 /inference="protein motif" | 123 /inference="protein motif" |
124 /db_xref="PFAM:PF00135" | 124 /db_xref="PFAM:PF00135" |
125 /db_xref="InterPro:IPR002018" | 125 /db_xref="InterPro:IPR002018" |
126 /note="e-value: 3.9706994470948554e-30" | 126 /note="e-value: 4.0935350990176556e-30" |
127 /note="p-value: 1.4799476135277136e-33" | 127 /note="p-value: 1.4799476135277136e-33" |
128 /function="Carboxylesterase family" | 128 /function="Carboxylesterase family" |
129 /standard_name="PF00135" | 129 /standard_name="PF00135" |
130 CDS 5477..6253 | 130 CDS 5477..6253 |
131 /inference="ab initio prediction:Prodigal:2.6" | 131 /inference="ab initio prediction:Prodigal:2.6" |
138 PEHVRVKGIGDNGDQDDGDEIGKLMARCGFINRLEY*" | 138 PEHVRVKGIGDNGDQDDGDEIGKLMARCGFINRLEY*" |
139 misc_feature 5480..6103 | 139 misc_feature 5480..6103 |
140 /inference="protein motif" | 140 /inference="protein motif" |
141 /db_xref="PFAM:PF00135" | 141 /db_xref="PFAM:PF00135" |
142 /db_xref="InterPro:IPR002018" | 142 /db_xref="InterPro:IPR002018" |
143 /note="e-value: 1.4185801852307574e-15" | 143 /note="e-value: 1.4624647008379705e-15" |
144 /note="p-value: 5.287291037013632e-19" | 144 /note="p-value: 5.287291037013632e-19" |
145 /function="Carboxylesterase family" | 145 /function="Carboxylesterase family" |
146 /standard_name="PF00135" | 146 /standard_name="PF00135" |
147 CDS 7412..8683 | 147 CDS 7412..8683 |
148 /inference="ab initio prediction:Prodigal:2.6" | 148 /inference="ab initio prediction:Prodigal:2.6" |
158 NIPGKKAEPLNWYVLVLGLGVSKR*" | 158 NIPGKKAEPLNWYVLVLGLGVSKR*" |
159 misc_feature 7448..7783 | 159 misc_feature 7448..7783 |
160 /inference="protein motif" | 160 /inference="protein motif" |
161 /db_xref="PFAM:PF13434" | 161 /db_xref="PFAM:PF13434" |
162 /db_xref="InterPro:IPR025700" | 162 /db_xref="InterPro:IPR025700" |
163 /note="e-value: 5.777178703900199e-08" | 163 /note="e-value: 5.955898730893757e-08" |
164 /note="p-value: 2.153253337271785e-11" | 164 /note="p-value: 2.153253337271785e-11" |
165 /function="L-lysine 6-monooxygenase (NADPH-requiring)" | 165 /function="L-lysine 6-monooxygenase (NADPH-requiring)" |
166 /standard_name="PF13434" | 166 /standard_name="PF13434" |
167 misc_feature 7517..7717 | 167 misc_feature 7517..7717 |
168 /inference="protein motif" | 168 /inference="protein motif" |
169 /db_xref="PFAM:PF00743" | 169 /db_xref="PFAM:PF00743" |
170 /db_xref="InterPro:IPR020946" | 170 /db_xref="InterPro:IPR020946" |
171 /note="e-value: 5.089108077410868e-07" | 171 /note="e-value: 5.246542281818287e-07" |
172 /note="p-value: 1.8967976434628658e-10" | 172 /note="p-value: 1.8967976434628658e-10" |
173 /function="Flavin-binding monooxygenase-like" | 173 /function="Flavin-binding monooxygenase-like" |
174 /standard_name="PF00743" | 174 /standard_name="PF00743" |
175 CDS 9454..10038 | 175 CDS 9454..10038 |
176 /inference="ab initio prediction:Prodigal:2.6" | 176 /inference="ab initio prediction:Prodigal:2.6" |
200 IGYQVLWALGCGMSTFQPPFFARCIFVGGY*" | 200 IGYQVLWALGCGMSTFQPPFFARCIFVGGY*" |
201 misc_feature 11204..12289 | 201 misc_feature 11204..12289 |
202 /inference="protein motif" | 202 /inference="protein motif" |
203 /db_xref="PFAM:PF07690" | 203 /db_xref="PFAM:PF07690" |
204 /db_xref="InterPro:IPR011701" | 204 /db_xref="InterPro:IPR011701" |
205 /note="e-value: 5.839871260376694e-37" | 205 /note="e-value: 6.020530714201243e-37" |
206 /note="p-value: 2.1766199255969786e-40" | 206 /note="p-value: 2.1766199255969786e-40" |
207 /function="Major Facilitator Superfamily" | 207 /function="Major Facilitator Superfamily" |
208 /standard_name="PF07690" | 208 /standard_name="PF07690" |
209 misc_feature 11252..11935 | 209 misc_feature 11252..11935 |
210 /inference="protein motif" | 210 /inference="protein motif" |
211 /db_xref="PFAM:PF06609" | 211 /db_xref="PFAM:PF06609" |
212 /db_xref="InterPro:IPR010573" | 212 /db_xref="InterPro:IPR010573" |
213 /note="e-value: 9.543170598318239e-09" | 213 /note="e-value: 9.83839354265682e-09" |
214 /note="p-value: 3.55690294383833e-12" | 214 /note="p-value: 3.55690294383833e-12" |
215 /function="Fungal trichothecene efflux pump (TRI12)" | 215 /function="Fungal trichothecene efflux pump (TRI12)" |
216 /standard_name="PF06609" | 216 /standard_name="PF06609" |
217 CDS 12335..12781 | 217 CDS 12335..12781 |
218 /inference="ab initio prediction:Prodigal:2.6" | 218 /inference="ab initio prediction:Prodigal:2.6" |
233 SDINKNRPGSCSLIYRSLGTFMQTRLGNTIEQLEDRLAAFDGEYTKNIG*" | 233 SDINKNRPGSCSLIYRSLGTFMQTRLGNTIEQLEDRLAAFDGEYTKNIG*" |
234 misc_feature 14988..15245 | 234 misc_feature 14988..15245 |
235 /inference="protein motif" | 235 /inference="protein motif" |
236 /db_xref="PFAM:PF08493" | 236 /db_xref="PFAM:PF08493" |
237 /db_xref="InterPro:IPR013700" | 237 /db_xref="InterPro:IPR013700" |
238 /note="e-value: 2.6165794251055913e-17" | 238 /note="e-value: 2.686865976406516e-17" |
239 /note="p-value: 9.752439154325723e-21" | 239 /note="p-value: 9.713904470016327e-21" |
240 /function="Aflatoxin regulatory protein" | 240 /function="Aflatoxin regulatory protein" |
241 /standard_name="PF08493" | 241 /standard_name="PF08493" |
242 CDS 16827..18797 | 242 CDS 16827..18797 |
243 /inference="ab initio prediction:Prodigal:2.6" | 243 /inference="ab initio prediction:Prodigal:2.6" |
244 /transl_table=11 | 244 /transl_table=11 |
257 KVAQAGCMAAVGMGASEIIHF*" | 257 KVAQAGCMAAVGMGASEIIHF*" |
258 misc_feature 16830..17570 | 258 misc_feature 16830..17570 |
259 /inference="protein motif" | 259 /inference="protein motif" |
260 /db_xref="PFAM:PF00109" | 260 /db_xref="PFAM:PF00109" |
261 /db_xref="InterPro:IPR014030" | 261 /db_xref="InterPro:IPR014030" |
262 /note="e-value: 9.025888536170949e-60" | 262 /note="e-value: 9.30510909096118e-60" |
263 /note="p-value: 3.364103069761815e-63" | 263 /note="p-value: 3.364103069761815e-63" |
264 /function="Beta-ketoacyl synthase, N-terminal domain" | 264 /function="Beta-ketoacyl synthase, N-terminal domain" |
265 /standard_name="PF00109" | 265 /standard_name="PF00109" |
266 misc_feature 17595..17930 | 266 misc_feature 17595..17930 |
267 /inference="protein motif" | 267 /inference="protein motif" |
268 /db_xref="PFAM:PF02801" | 268 /db_xref="PFAM:PF02801" |
269 /db_xref="InterPro:IPR014031" | 269 /db_xref="InterPro:IPR014031" |
270 /note="e-value: 2.2171445990751238e-35" | 270 /note="e-value: 2.2857331200304854e-35" |
271 /note="p-value: 8.263677223537547e-39" | 271 /note="p-value: 8.263677223537547e-39" |
272 /function="Beta-ketoacyl synthase, C-terminal domain" | 272 /function="Beta-ketoacyl synthase, C-terminal domain" |
273 /standard_name="PF02801" | 273 /standard_name="PF02801" |
274 misc_feature 17937..18287 | 274 misc_feature 17937..18290 |
275 /inference="protein motif" | 275 /inference="protein motif" |
276 /db_xref="PFAM:PF16197" | 276 /db_xref="PFAM:PF16197" |
277 /db_xref="InterPro:IPR032821" | 277 /db_xref="InterPro:IPR032821" |
278 /note="e-value: 3.8698172759236842e-25" | 278 /note="e-value: 4.800730099641783e-25" |
279 /note="p-value: 1.4423471024687604e-28" | 279 /note="p-value: 1.7356218726109122e-28" |
280 /function="Ketoacyl-synthetase C-terminal extension" | 280 /function="Ketoacyl-synthetase C-terminal extension" |
281 /standard_name="PF16197" | 281 /standard_name="PF16197" |
282 misc_feature 18360..18770 | 282 misc_feature 18360..18770 |
283 /inference="protein motif" | 283 /inference="protein motif" |
284 /db_xref="PFAM:PF00698" | 284 /db_xref="PFAM:PF00698" |
285 /db_xref="InterPro:IPR014043" | 285 /db_xref="InterPro:IPR014043" |
286 /note="e-value: 1.0799913424517567e-26" | 286 /note="e-value: 1.113401436161595e-26" |
287 /note="p-value: 4.025312495161225e-30" | 287 /note="p-value: 4.025312495161225e-30" |
288 /function="Acyl transferase domain" | 288 /function="Acyl transferase domain" |
289 /standard_name="PF00698" | 289 /standard_name="PF00698" |
290 CDS 18806..22078 | 290 CDS 18806..22078 |
291 /inference="ab initio prediction:Prodigal:2.6" | 291 /inference="ab initio prediction:Prodigal:2.6" |
312 LAWQADAGQQVQLLGDDEVELQVDTAGVNFLVRCSFQFQGES*" | 312 LAWQADAGQQVQLLGDDEVELQVDTAGVNFLVRCSFQFQGES*" |
313 misc_feature 18809..19258 | 313 misc_feature 18809..19258 |
314 /inference="protein motif" | 314 /inference="protein motif" |
315 /db_xref="PFAM:PF00698" | 315 /db_xref="PFAM:PF00698" |
316 /db_xref="InterPro:IPR014043" | 316 /db_xref="InterPro:IPR014043" |
317 /note="e-value: 2.639223271303753e-16" | 317 /note="e-value: 2.7208690154402465e-16" |
318 /note="p-value: 9.836836642950999e-20" | 318 /note="p-value: 9.836836642950999e-20" |
319 /function="Acyl transferase domain" | 319 /function="Acyl transferase domain" |
320 /standard_name="PF00698" | 320 /standard_name="PF00698" |
321 misc_feature 19487..20317 | 321 misc_feature 19487..20317 |
322 /inference="protein motif" | 322 /inference="protein motif" |
323 /db_xref="PFAM:PF14765" | 323 /db_xref="PFAM:PF14765" |
324 /db_xref="InterPro:IPR020807" | 324 /db_xref="InterPro:IPR020807" |
325 /note="e-value: 2.520598829779557e-60" | 325 /note="e-value: 2.598574865139864e-60" |
326 /note="p-value: 9.394703055458656e-64" | 326 /note="p-value: 9.394703055458656e-64" |
327 /function="Polyketide synthase dehydratase" | 327 /function="Polyketide synthase dehydratase" |
328 /standard_name="PF14765" | 328 /standard_name="PF14765" |
329 misc_feature 20786..21256 | 329 misc_feature 20786..21256 |
330 /inference="protein motif" | 330 /inference="protein motif" |
331 /db_xref="PFAM:PF13489" | 331 /db_xref="PFAM:PF13489" |
332 /note="e-value: 1.0131254482174088e-12" | 332 /note="e-value: 1.04446701072283e-12" |
333 /note="p-value: 3.776091868123029e-16" | 333 /note="p-value: 3.776091868123029e-16" |
334 /function="Methyltransferase domain" | 334 /function="Methyltransferase domain" |
335 /standard_name="PF13489" | 335 /standard_name="PF13489" |
336 misc_feature 20801..21133 | 336 misc_feature 20801..21133 |
337 /inference="protein motif" | 337 /inference="protein motif" |
338 /db_xref="PFAM:PF13847" | 338 /db_xref="PFAM:PF13847" |
339 /db_xref="InterPro:IPR025714" | 339 /db_xref="InterPro:IPR025714" |
340 /note="e-value: 8.939870258494623e-11" | 340 /note="e-value: 8.752004453621267e-11" |
341 /note="p-value: 3.332042586095648e-14" | 341 /note="p-value: 3.1641375465008194e-14" |
342 /function="Methyltransferase domain" | 342 /function="Methyltransferase domain" |
343 /standard_name="PF13847" | 343 /standard_name="PF13847" |
344 misc_feature 20804..21097 | 344 misc_feature 20804..21097 |
345 /inference="protein motif" | 345 /inference="protein motif" |
346 /db_xref="PFAM:PF13649" | 346 /db_xref="PFAM:PF13649" |
347 /db_xref="InterPro:IPR041698" | 347 /db_xref="InterPro:IPR041698" |
348 /note="e-value: 2.319131521369124e-13" | 348 /note="e-value: 2.4253465299984994e-13" |
349 /note="p-value: 8.643799930559537e-17" | 349 /note="p-value: 8.76842563267715e-17" |
350 /function="Methyltransferase domain" | 350 /function="Methyltransferase domain" |
351 /standard_name="PF13649" | 351 /standard_name="PF13649" |
352 misc_feature 20807..21103 | 352 misc_feature 20807..21103 |
353 /inference="protein motif" | 353 /inference="protein motif" |
354 /db_xref="PFAM:PF08242" | 354 /db_xref="PFAM:PF08242" |
355 /db_xref="InterPro:IPR013217" | 355 /db_xref="InterPro:IPR013217" |
356 /note="e-value: 3.6288099491186147e-22" | 356 /note="e-value: 3.7410690716593694e-22" |
357 /note="p-value: 1.3525195486837923e-25" | 357 /note="p-value: 1.3525195486837923e-25" |
358 /function="Methyltransferase domain" | 358 /function="Methyltransferase domain" |
359 /standard_name="PF08242" | 359 /standard_name="PF08242" |
360 misc_feature 20807..21106 | 360 misc_feature 20807..21106 |
361 /inference="protein motif" | 361 /inference="protein motif" |
362 /db_xref="PFAM:PF08241" | 362 /db_xref="PFAM:PF08241" |
363 /db_xref="InterPro:IPR013216" | 363 /db_xref="InterPro:IPR013216" |
364 /note="e-value: 5.245291385894328e-12" | 364 /note="e-value: 5.4075572021556884e-12" |
365 /note="p-value: 1.9550098344742185e-15" | 365 /note="p-value: 1.9550098344742185e-15" |
366 /function="Methyltransferase domain" | 366 /function="Methyltransferase domain" |
367 /standard_name="PF08241" | 367 /standard_name="PF08241" |
368 CDS 22416..22889 | 368 CDS 22416..22889 |
369 /inference="ab initio prediction:Prodigal:2.6" | 369 /inference="ab initio prediction:Prodigal:2.6" |
374 TAANQGQFPIDSFHPNMSYASVDIIDYIKRRPKESKRYVITFRHSYQLCPACN*" | 374 TAANQGQFPIDSFHPNMSYASVDIIDYIKRRPKESKRYVITFRHSYQLCPACN*" |
375 misc_feature 22449..22766 | 375 misc_feature 22449..22766 |
376 /inference="protein motif" | 376 /inference="protein motif" |
377 /db_xref="PFAM:PF00107" | 377 /db_xref="PFAM:PF00107" |
378 /db_xref="InterPro:IPR013149" | 378 /db_xref="InterPro:IPR013149" |
379 /note="e-value: 1.0960342036668699e-15" | 379 /note="e-value: 1.1299405916297285e-15" |
380 /note="p-value: 4.085106983476965e-19" | 380 /note="p-value: 4.085106983476965e-19" |
381 /function="Zinc-binding dehydrogenase" | 381 /function="Zinc-binding dehydrogenase" |
382 /standard_name="PF00107" | 382 /standard_name="PF00107" |
383 CDS 22922..24277 | 383 CDS 22922..24277 |
384 /inference="ab initio prediction:Prodigal:2.6" | 384 /inference="ab initio prediction:Prodigal:2.6" |
394 DSLAAVEMRSWLKSSLGLDISVLEIMASPSLAAMGEHVIRELVRKFGGDNKN*" | 394 DSLAAVEMRSWLKSSLGLDISVLEIMASPSLAAMGEHVIRELVRKFGGDNKN*" |
395 misc_feature 23114..23638 | 395 misc_feature 23114..23638 |
396 /inference="protein motif" | 396 /inference="protein motif" |
397 /db_xref="PFAM:PF08659" | 397 /db_xref="PFAM:PF08659" |
398 /db_xref="InterPro:IPR013968" | 398 /db_xref="InterPro:IPR013968" |
399 /note="e-value: 1.5141662612831146e-61" | 399 /note="e-value: 1.5610077818520667e-61" |
400 /note="p-value: 5.643556695054471e-65" | 400 /note="p-value: 5.643556695054471e-65" |
401 /function="KR domain" | 401 /function="KR domain" |
402 /standard_name="PF08659" | 402 /standard_name="PF08659" |
403 misc_feature 23123..23584 | 403 misc_feature 23123..23584 |
404 /inference="protein motif" | 404 /inference="protein motif" |
405 /db_xref="PFAM:PF00106" | 405 /db_xref="PFAM:PF00106" |
406 /db_xref="InterPro:IPR002347" | 406 /db_xref="InterPro:IPR002347" |
407 /note="e-value: 1.1379002942545491e-07" | 407 /note="e-value: 1.1731018314976082e-07" |
408 /note="p-value: 4.2411490654288077e-11" | 408 /note="p-value: 4.2411490654288077e-11" |
409 /function="short chain dehydrogenase" | 409 /function="short chain dehydrogenase" |
410 /standard_name="PF00106" | 410 /standard_name="PF00106" |
411 misc_feature 24071..24232 | 411 misc_feature 24071..24232 |
412 /inference="protein motif" | 412 /inference="protein motif" |
413 /db_xref="PFAM:PF00550" | 413 /db_xref="PFAM:PF00550" |
414 /db_xref="InterPro:IPR009081" | 414 /db_xref="InterPro:IPR009081" |
415 /note="e-value: 3.359618716013185e-10" | 415 /note="e-value: 3.463550267794435e-10" |
416 /note="p-value: 1.2521873708584363e-13" | 416 /note="p-value: 1.2521873708584363e-13" |
417 /function="Phosphopantetheine attachment site" | 417 /function="Phosphopantetheine attachment site" |
418 /standard_name="PF00550" | 418 /standard_name="PF00550" |
419 CDS 25423..25710 | 419 CDS 25423..25710 |
420 /inference="ab initio prediction:Prodigal:2.6" | 420 /inference="ab initio prediction:Prodigal:2.6" |
424 EVARIPNGYQARISRFSSIAELLSQRREHGVDASLEQALTVVYQLASFMR*" | 424 EVARIPNGYQARISRFSSIAELLSQRREHGVDASLEQALTVVYQLASFMR*" |
425 misc_feature 25444..25704 | 425 misc_feature 25444..25704 |
426 /inference="protein motif" | 426 /inference="protein motif" |
427 /db_xref="PFAM:PF16073" | 427 /db_xref="PFAM:PF16073" |
428 /db_xref="InterPro:IPR032088" | 428 /db_xref="InterPro:IPR032088" |
429 /note="e-value: 1.3071857188363548e-23" | 429 /note="e-value: 9.422238725791962e-24" |
430 /note="p-value: 4.872104803713585e-27" | 430 /note="p-value: 3.406449286258844e-27" |
431 /function="Starter unit:ACP transacylase in aflatoxin | 431 /function="Starter unit:ACP transacylase in aflatoxin |
432 biosynthesis" | 432 biosynthesis" |
433 /standard_name="PF16073" | 433 /standard_name="PF16073" |
434 CDS 26198..29653 | 434 CDS 26198..29653 |
435 /inference="ab initio prediction:Prodigal:2.6" | 435 /inference="ab initio prediction:Prodigal:2.6" |
457 HRIVDEKSTEGTFSITCESDVSRPDLSPLVQGHKVEGIGLCTPV*" | 457 HRIVDEKSTEGTFSITCESDVSRPDLSPLVQGHKVEGIGLCTPV*" |
458 misc_feature 26201..26338 | 458 misc_feature 26201..26338 |
459 /inference="protein motif" | 459 /inference="protein motif" |
460 /db_xref="PFAM:PF16073" | 460 /db_xref="PFAM:PF16073" |
461 /db_xref="InterPro:IPR032088" | 461 /db_xref="InterPro:IPR032088" |
462 /note="e-value: 8.208876065249628e-11" | 462 /note="e-value: 4.380197593141013e-11" |
463 /note="p-value: 3.059588544632735e-14" | 463 /note="p-value: 1.5835855362042708e-14" |
464 /function="Starter unit:ACP transacylase in aflatoxin | 464 /function="Starter unit:ACP transacylase in aflatoxin |
465 biosynthesis" | 465 biosynthesis" |
466 /standard_name="PF16073" | 466 /standard_name="PF16073" |
467 misc_feature 26729..27475 | 467 misc_feature 26729..27475 |
468 /inference="protein motif" | 468 /inference="protein motif" |
469 /db_xref="PFAM:PF00109" | 469 /db_xref="PFAM:PF00109" |
470 /db_xref="InterPro:IPR014030" | 470 /db_xref="InterPro:IPR014030" |
471 /note="e-value: 2.667462237983852e-82" | 471 /note="e-value: 2.7499815692371726e-82" |
472 /note="p-value: 9.942088102809735e-86" | 472 /note="p-value: 9.942088102809735e-86" |
473 /function="Beta-ketoacyl synthase, N-terminal domain" | 473 /function="Beta-ketoacyl synthase, N-terminal domain" |
474 /standard_name="PF00109" | 474 /standard_name="PF00109" |
475 misc_feature 27497..27862 | 475 misc_feature 27497..27862 |
476 /inference="protein motif" | 476 /inference="protein motif" |
477 /db_xref="PFAM:PF02801" | 477 /db_xref="PFAM:PF02801" |
478 /db_xref="InterPro:IPR014031" | 478 /db_xref="InterPro:IPR014031" |
479 /note="e-value: 2.4031043351141288e-34" | 479 /note="e-value: 2.4774456171918303e-34" |
480 /note="p-value: 8.956780973217029e-38" | 480 /note="p-value: 8.956780973217029e-38" |
481 /function="Beta-ketoacyl synthase, C-terminal domain" | 481 /function="Beta-ketoacyl synthase, C-terminal domain" |
482 /standard_name="PF02801" | 482 /standard_name="PF02801" |
483 misc_feature 27896..28216 | 483 misc_feature 27896..28216 |
484 /inference="protein motif" | 484 /inference="protein motif" |
485 /db_xref="PFAM:PF16197" | 485 /db_xref="PFAM:PF16197" |
486 /db_xref="InterPro:IPR032821" | 486 /db_xref="InterPro:IPR032821" |
487 /note="e-value: 2.535893425129411e-07" | 487 /note="e-value: 8.475099126640419e-07" |
488 /note="p-value: 9.451708628883381e-11" | 488 /note="p-value: 3.0640271607521397e-10" |
489 /function="Ketoacyl-synthetase C-terminal extension" | 489 /function="Ketoacyl-synthetase C-terminal extension" |
490 /standard_name="PF16197" | 490 /standard_name="PF16197" |
491 misc_feature 28322..29233 | 491 misc_feature 28322..29233 |
492 /inference="protein motif" | 492 /inference="protein motif" |
493 /db_xref="PFAM:PF00698" | 493 /db_xref="PFAM:PF00698" |
494 /db_xref="InterPro:IPR014043" | 494 /db_xref="InterPro:IPR014043" |
495 /note="e-value: 4.597134671955754e-38" | 495 /note="e-value: 4.739349423268586e-38" |
496 /note="p-value: 1.7134307387088164e-41" | 496 /note="p-value: 1.7134307387088164e-41" |
497 /function="Acyl transferase domain" | 497 /function="Acyl transferase domain" |
498 /standard_name="PF00698" | 498 /standard_name="PF00698" |
499 CDS 29804..30544 | 499 CDS 29804..30544 |
500 /inference="ab initio prediction:Prodigal:2.6" | 500 /inference="ab initio prediction:Prodigal:2.6" |
507 GDVVVLSGENLVACVRGLTVSRET*" | 507 GDVVVLSGENLVACVRGLTVSRET*" |
508 misc_feature 29918..30535 | 508 misc_feature 29918..30535 |
509 /inference="protein motif" | 509 /inference="protein motif" |
510 /db_xref="PFAM:PF14765" | 510 /db_xref="PFAM:PF14765" |
511 /db_xref="InterPro:IPR020807" | 511 /db_xref="InterPro:IPR020807" |
512 /note="e-value: 7.778696660229127e-11" | 512 /note="e-value: 8.019334685871699e-11" |
513 /note="p-value: 2.8992533209948296e-14" | 513 /note="p-value: 2.8992533209948296e-14" |
514 /function="Polyketide synthase dehydratase" | 514 /function="Polyketide synthase dehydratase" |
515 /standard_name="PF14765" | 515 /standard_name="PF14765" |
516 CDS 30591..32633 | 516 CDS 30591..32633 |
517 /inference="ab initio prediction:Prodigal:2.6" | 517 /inference="ab initio prediction:Prodigal:2.6" |
531 KFLTERRTDFSAGSWGHMFPGTEVLIETAYGADHFSLLVSLLFRD*" | 531 KFLTERRTDFSAGSWGHMFPGTEVLIETAYGADHFSLLVSLLFRD*" |
532 misc_feature 30789..30974 | 532 misc_feature 30789..30974 |
533 /inference="protein motif" | 533 /inference="protein motif" |
534 /db_xref="PFAM:PF00550" | 534 /db_xref="PFAM:PF00550" |
535 /db_xref="InterPro:IPR009081" | 535 /db_xref="InterPro:IPR009081" |
536 /note="e-value: 5.884377030377924e-14" | 536 /note="e-value: 6.066413293337807e-14" |
537 /note="p-value: 2.193207987468477e-17" | 537 /note="p-value: 2.193207987468477e-17" |
538 /function="Phosphopantetheine attachment site" | 538 /function="Phosphopantetheine attachment site" |
539 /standard_name="PF00550" | 539 /standard_name="PF00550" |
540 misc_feature 31110..31304 | 540 misc_feature 31110..31304 |
541 /inference="protein motif" | 541 /inference="protein motif" |
542 /db_xref="PFAM:PF00550" | 542 /db_xref="PFAM:PF00550" |
543 /db_xref="InterPro:IPR009081" | 543 /db_xref="InterPro:IPR009081" |
544 /note="e-value: 3.9212317886052276e-10" | 544 /note="e-value: 4.042537132792419e-10" |
545 /note="p-value: 1.461510170930014e-13" | 545 /note="p-value: 1.461510170930014e-13" |
546 /function="Phosphopantetheine attachment site" | 546 /function="Phosphopantetheine attachment site" |
547 /standard_name="PF00550" | 547 /standard_name="PF00550" |
548 misc_feature 31485..31670 | 548 misc_feature 31485..31670 |
549 /inference="protein motif" | 549 /inference="protein motif" |
550 /db_xref="PFAM:PF00550" | 550 /db_xref="PFAM:PF00550" |
551 /db_xref="InterPro:IPR009081" | 551 /db_xref="InterPro:IPR009081" |
552 /note="e-value: 1.367829688372301e-08" | 552 /note="e-value: 1.4101442109719659e-08" |
553 /note="p-value: 5.098135252971677e-12" | 553 /note="p-value: 5.098135252971677e-12" |
554 /function="Phosphopantetheine attachment site" | 554 /function="Phosphopantetheine attachment site" |
555 /standard_name="PF00550" | 555 /standard_name="PF00550" |
556 misc_feature 31917..32240 | 556 misc_feature 31917..32240 |
557 /inference="protein motif" | 557 /inference="protein motif" |
558 /db_xref="PFAM:PF00975" | 558 /db_xref="PFAM:PF00975" |
559 /db_xref="InterPro:IPR001031" | 559 /db_xref="InterPro:IPR001031" |
560 /note="e-value: 6.711355516947163e-24" | 560 /note="e-value: 6.91897478936856e-24" |
561 /note="p-value: 2.5014370171252933e-27" | 561 /note="p-value: 2.5014370171252933e-27" |
562 /function="Thioesterase domain" | 562 /function="Thioesterase domain" |
563 /standard_name="PF00975" | 563 /standard_name="PF00975" |
564 ORIGIN | 564 ORIGIN |
565 1 ttacatccgc ttagtctcct cggacttcca tgcttccttg tccattgaga aacgatccct | 565 1 ttacatccgc ttagtctcct cggacttcca tgcttccttg tccattgaga aacgatccct |