Mercurial > repos > althonos > gecco
comparison test-data/BGC0001866.sideload.json @ 20:64b724dd8d04 draft
Regenerate Galaxy test files with Pyrodigal `v2.1.0`
author | althonos |
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date | Mon, 27 Mar 2023 13:32:49 +0000 |
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19:cc91d730cc4f | 20:64b724dd8d04 |
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1 { | |
2 "records": [ | |
3 { | |
4 "name": "BGC0001866.1", | |
5 "subregions": [ | |
6 { | |
7 "details": { | |
8 "alkaloid_probability": "0.010", | |
9 "average_p": "0.996", | |
10 "max_p": "1.000", | |
11 "nrp_probability": "0.140", | |
12 "polyketide_probability": "0.960", | |
13 "ripp_probability": "0.000", | |
14 "saccharide_probability": "0.000", | |
15 "terpene_probability": "0.010" | |
16 }, | |
17 "end": 32979, | |
18 "label": "Polyketide", | |
19 "start": 347 | |
20 } | |
21 ] | |
22 } | |
23 ], | |
24 "tool": { | |
25 "configuration": { | |
26 "cds": "3", | |
27 "e-filter": "None", | |
28 "edge-distance": "0", | |
29 "mask": "False", | |
30 "no-pad": "False", | |
31 "p-filter": "1e-09", | |
32 "postproc": "'gecco'", | |
33 "threshold": "0.8" | |
34 }, | |
35 "description": "Biosynthetic Gene Cluster prediction with Conditional Random Fields.", | |
36 "name": "GECCO", | |
37 "version": "0.9.6" | |
38 } | |
39 } |