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comparison CHANGELOG.md @ 10:9156eb4ee20c draft

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"Release v0.9.1-alpha1"
author althonos
date Sun, 20 Mar 2022 15:44:07 +0000
parents d64fe390f3c9
children 40a525d0e1fe
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9:d64fe390f3c9 10:9156eb4ee20c
3 3
4 The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/) 4 The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/)
5 and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html). 5 and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html).
6 6
7 ## [Unreleased] 7 ## [Unreleased]
8 [Unreleased]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.10...master 8 [Unreleased]: https://git.embl.de/grp-zeller/GECCO/compare/v0.9.1-alpha1...master
9
10 ## [v0.9.1-alpha1] - 2022-03-20
11 [v0.9.1-alpha1]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.10...v0.9.1-alpha1
12 Candidate release with support for a sliding window in the CRF prediction algorithm.
9 13
10 ## [v0.8.10] - 2022-02-23 14 ## [v0.8.10] - 2022-02-23
11 [v0.8.10]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.9...v0.8.10 15 [v0.8.10]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.9...v0.8.10
12 ### Fixed 16 ### Fixed
13 - `--antismash-sideload` flag of `gecco run` causing command to crash. 17 - `--antismash-sideload` flag of `gecco run` causing command to crash.
65 69
66 ## [v0.8.3] - 2021-08-23 70 ## [v0.8.3] - 2021-08-23
67 [v0.8.3]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.2...v0.8.3 71 [v0.8.3]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.2...v0.8.3
68 ### Changed 72 ### Changed
69 - Default probability threshold for segmentation to 0.3 (from 0.4). 73 - Default probability threshold for segmentation to 0.3 (from 0.4).
70
71 ## [v0.9.0] - 2021-08-10 - **YANKED**
72 [v0.9.0]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.2...v0.9.0
73 ### Changed
74 - Retrain internal model using `--select=0.35` instead of `--select=0.25` like before.
75 - Change default *p-value* filter from 1e-9 to 1e-5 to detect more features.
76 74
77 ## [v0.8.2] - 2021-07-31 75 ## [v0.8.2] - 2021-07-31
78 [v0.8.2]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.1...v0.8.2 76 [v0.8.2]: https://git.embl.de/grp-zeller/GECCO/compare/v0.8.1...v0.8.2
79 ### Fixed 77 ### Fixed
80 - `gecco run` crashing on Python 3.6 because of missing `contextlib.nullcontext` class. 78 - `gecco run` crashing on Python 3.6 because of missing `contextlib.nullcontext` class.