Mercurial > repos > alvarofaure > bitlab
comparison chromeister/bin/recompute_scores.sh @ 0:7fdf47a0bae8 draft
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| author | alvarofaure |
|---|---|
| date | Wed, 12 Dec 2018 07:18:40 -0500 |
| parents | |
| children |
comparison
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| -1:000000000000 | 0:7fdf47a0bae8 |
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| 1 #!/usr/bin/env bash | |
| 2 | |
| 3 if [ $# -ne 1 ]; then | |
| 4 echo " ==== ERROR ... you called this script inappropriately." | |
| 5 echo "" | |
| 6 echo " usage: $0 <#threads>" | |
| 7 echo "" | |
| 8 exit -1 | |
| 9 fi | |
| 10 | |
| 11 BINDIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" | |
| 12 THREADS=$1 | |
| 13 | |
| 14 | |
| 15 for p in */; | |
| 16 do | |
| 17 | |
| 18 echo "Entering $p" | |
| 19 cd $p | |
| 20 | |
| 21 | |
| 22 | |
| 23 thepaths=() | |
| 24 n=0 | |
| 25 # Grab the routes | |
| 26 for i in *.mat ; | |
| 27 do | |
| 28 | |
| 29 thepaths[$n]=$i | |
| 30 n=`expr $n + 1` | |
| 31 | |
| 32 done | |
| 33 | |
| 34 i=0 | |
| 35 aux=0 | |
| 36 for ((i=0; i < $n ; i+=$THREADS)) | |
| 37 do | |
| 38 aux=$i | |
| 39 for ((j=0; j<$THREADS; j++)) | |
| 40 do | |
| 41 if [ "$aux" -lt "$n" ]; then | |
| 42 echo "Recomputing ${thepaths[$aux]}" | |
| 43 goodpath=${thepaths[$aux]%.mat} | |
| 44 Rscript $BINDIR/compute_score.R ${thepaths[$aux]} > ${goodpath}.scr.txt & | |
| 45 aux=`expr $aux + 1` | |
| 46 fi | |
| 47 done | |
| 48 | |
| 49 for job in `jobs -p` | |
| 50 do | |
| 51 #echo $job | |
| 52 wait $job | |
| 53 done | |
| 54 | |
| 55 done | |
| 56 | |
| 57 | |
| 58 echo "Exiting $p" | |
| 59 cd .. | |
| 60 | |
| 61 | |
| 62 done | |
| 63 | |
| 64 |