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comparison chromeister/bin/recompute_scores.sh @ 1:3d1fbde7e0cc draft default tip

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author alvarofaure
date Thu, 13 Dec 2018 03:41:58 -0500
parents 7fdf47a0bae8
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0:7fdf47a0bae8 1:3d1fbde7e0cc
1 #!/usr/bin/env bash
2
3 if [ $# -ne 1 ]; then
4 echo " ==== ERROR ... you called this script inappropriately."
5 echo ""
6 echo " usage: $0 <#threads>"
7 echo ""
8 exit -1
9 fi
10
11 BINDIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
12 THREADS=$1
13
14
15 for p in */;
16 do
17
18 echo "Entering $p"
19 cd $p
20
21
22
23 thepaths=()
24 n=0
25 # Grab the routes
26 for i in *.mat ;
27 do
28
29 thepaths[$n]=$i
30 n=`expr $n + 1`
31
32 done
33
34 i=0
35 aux=0
36 for ((i=0; i < $n ; i+=$THREADS))
37 do
38 aux=$i
39 for ((j=0; j<$THREADS; j++))
40 do
41 if [ "$aux" -lt "$n" ]; then
42 echo "Recomputing ${thepaths[$aux]}"
43 goodpath=${thepaths[$aux]%.mat}
44 Rscript $BINDIR/compute_score.R ${thepaths[$aux]} > ${goodpath}.scr.txt &
45 aux=`expr $aux + 1`
46 fi
47 done
48
49 for job in `jobs -p`
50 do
51 #echo $job
52 wait $job
53 done
54
55 done
56
57
58 echo "Exiting $p"
59 cd ..
60
61
62 done
63
64