Mercurial > repos > amol > cmpfastq
diff tool_dependencies.xml @ 12:b8a437680259 draft
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author | amol |
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date | Thu, 27 Jun 2013 15:50:07 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Jun 27 15:50:07 2013 -0400 @@ -0,0 +1,22 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="cmpfastq" version="1.0.0"> + <install version="1.0"> + <actions> + <action type="download_by_url" target_filename="cmpfastq.plx"> +http://compbio.brc.iop.kcl.ac.uk/software/download/cmpfastq </action> + <action type="shell_command">make</action> + <action type="move_file"> + <source>cmpfastq/bin</source> + <destination>$INSTALL_DIR</destination> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + <readme> + View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator. + </readme> + </package> +</tool_dependency> \ No newline at end of file