Mercurial > repos > amol > cmpfastq

diff tool_dependencies.xml @ 4:e43ea4c01683 draft

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author amol
date Thu, 27 Jun 2013 11:49:58 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Jun 27 11:49:58 2013 -0400
@@ -0,0 +1,17 @@
+<?xml version="1.0"?>
+<tool_dependency>
+	<package name="cmpfastq" version="1">
+		<install version="1.0">
+			<actions>
+				<action type="shell_command">curl -o "cmpfastq.plx" http://compbio.brc.iop.kcl.ac.uk/software/download/cmpfastq</action>
+				<action type="move_directory_files">
+					<source_directory>bin</source_directory>
+					<destination_directory>$INSTALL_DIR/bin</destination_directory>
+				</action>
+				<action type="set_environment">
+					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+				</action>
+			</actions>
+		</install>
+	</package>
+</tool_dependency>
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