Mercurial > repos > amol > cmpfastq

changeset 18:fcf6244ff26e draft

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Uploaded
author amol
date Thu, 27 Jun 2013 16:00:18 -0400
parents 0e2394f98aa5
children dc04617e099c
files tool_dependencies.xml
diffstat 1 files changed, 21 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Jun 27 16:00:18 2013 -0400
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="cmpfastq" version="1.0.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url" target_filename="cmpfastq.plx">
+http://compbio.brc.iop.kcl.ac.uk/software/download/cmpfastq                </action>
+                <action type="move_file">
+                    <source>cmpfastq.plx</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+           View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator.
+        </readme>
+    </package>
+</tool_dependency>
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