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view trinityStats.xml @ 4:bc69ce5c2914

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changed tool dependency to trinity package version 20140717
author anmoljh <anmol.jh@gmail.com>
date Wed, 26 Aug 2015 15:13:00 +0100
parents 0a8d55375004
children 8c77dcef9e1f
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<tool id='id_trinity_stats' name='Trinity Stats' version='1.0'>
    <description></description>

    <requirements>
        <requirement type="package" version="2013_08_14">trinityrnaseq</requirement>
    </requirements>

    <command>\$TRINITY_HOME/util/TrinityStats.pl  $fastafile  &gt; $statsfile 2&gt;&amp;1;</command>

    <inputs>
	    <!-- Required -->

	    <param name='fastafile'  type="data" format="fasta" label='Trinity Assembly' help='Trinity Assembled fasta file'/>
  
	     <!-- Optional -->

    </inputs>

    <outputs>
        <data name='statsfile' format='tabular' label="${tool.name} on ${on_string}: "/>
    </outputs>
</tool>