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comparison tool_dependencies.xml @ 9:085d1f2a7a8f draft

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author antmarge
date Sat, 18 Mar 2017 19:08:31 -0400
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8:fb9082f69bba 9:085d1f2a7a8f
1 <?xml version="1.0"?>
2 <tool_dependency>
3
4 <set_environment version="1.0">
5 <environment_variable action="set_to" name="LINKYX_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
6 </set_environment>
7
8 <package name="perl" version="5.18.1">
9 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
10 </package>
11
12 <package name="bioperl" version="1.6.922">
13 <install version="1.0">
14 <actions>
15 <action type="set_environment_for_install">
16 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
17 <package name="perl" version="5.18.1" />
18 </repository>
19 </action>
20 <action type="setup_perl_environment">
21
22 <!-- allow downloading and installing an Perl package from cpan.org-->
23 <package>Getopt::Long</package>
24 <package>http://search.cpan.org/CPAN/authors/id/C/CJ/CJFIELDS/BioPerl-1.007001.tar.gz</package>
25 </action>
26 </actions>
27 </install>
28 <readme>
29 Bundle::BioPerl
30 </readme>
31 </package>
32 </tool_dependency>