--- a/tool_dependencies.xml	Tue Aug 26 11:38:40 2014 -0400
+++ b/tool_dependencies.xml	Wed Sep 10 14:15:11 2014 -0400
@@ -7,15 +7,9 @@
                     <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/bamtools/bamtools-2.3.0_2d7685d2ae.tar.gz</action>
                     <action type="move_directory_files">
                         <source_directory>.</source_directory>
-                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
                     </action>       
                 </actions>                
-                <actions>
-                    <action type="move_directory_files">
-                        <source_directory>bin</source_directory>
-                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
-                    </action>
-                </actions>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                 </action>
@@ -26,4 +20,4 @@
 This is package dependency for tools relying on bamtools toolkit developed by by Derek Barnett (https://github.com/pezmaster31/bamtools). This package is distributed as x86_64 binaries only. These binaries should work on any of our stated supported linux platforms other than RHEL/CentOS 5.
         </readme>
     </package>
-</tool_dependency>
\ No newline at end of file
+</tool_dependency>