Mercurial > repos > anton > vcfannotate
diff vcfannotate.xml @ 3:28459b837ef8 draft default tip
Uploaded
author | anton |
---|---|
date | Mon, 15 Sep 2014 14:48:28 -0400 (2014-09-15) |
parents | 98961914308d |
children |
line wrap: on
line diff
--- a/vcfannotate.xml Wed Jun 25 16:34:28 2014 -0400 +++ b/vcfannotate.xml Mon Sep 15 14:48:28 2014 -0400 @@ -1,12 +1,12 @@ <tool id="vcfannotate" name="VCFannotate:" version="0.0.2"> <requirements> - <requirement type="package" version="86723982aa">vcflib</requirement> + <requirement type="package" version="8a5602bf07">vcflib</requirement> </requirements> <description>Intersect VCF records with BED annotations</description> <command>vcfannotate --key "${key_option}" -b "${bed_data}" "${input}" > "${out_file1}"</command> <inputs> <param format="vcf" name="input" type="data" label="Select VCF dataset"/> - <param name="bed_data" type="data" format="bed" label="BED datasets to itersect with"/> + <param name="bed_data" type="data" format="bed" label="Select BED dataset to itersect with"/> <param name="key_option" size="20" type="text" value="BED-features" label="Intersecting VCF records will be prefixed with this TAG within the INFO field" help="--key option"/> </inputs> <outputs> @@ -22,7 +22,7 @@ </tests> <help> -Intersect the records in the VCF file with targets provided in a BED file. Intersections are done on the reference sequences in the VCF file. +Intersect the records in the VCF file with intervals (features) provided in a BED file. Intersections are done on the reference sequences in the VCF file. -----