Mercurial > repos > anton > vcffixup

comparison vcffixup.xml @ 1:ad5153826912

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Updated to vcflib 86723982aa
author Anton Nekrutenko <anton@bx.psu.edu>
date Wed, 25 Jun 2014 16:14:35 -0400
parents 07ef509fddbb
children 9f0d84b2deba
comparison
equal deleted inserted replaced
0:07ef509fddbb 1:ad5153826912
1 <tool id="vcffixup" name="VCFfixup:" version="0.0.1"> 1 <tool id="vcffixup" name="VCFfixup:" version="0.0.1">
2 <requirements> 2 <requirements>
3 <requirement type="package" version="586c5ae5d57a38dae6b32ea831fb1f7cfa14c9bd">vcflib</requirement> 3 <requirement type="package" version="86723982aa">vcflib</requirement>
4 </requirements> 4 </requirements>
5 <description>Count the allele frequencies across alleles present in each record in the VCF file</description> 5 <description>Count the allele frequencies across alleles present in each record in the VCF file</description>
6 <command>vcffixup "${input1}" > "${out_file1}"</command> 6 <command>vcffixup "${input1}" > "${out_file1}"</command>
7 <inputs> 7 <inputs>
8 <param format="vcf" name="input1" type="data" label="Select VCF dataset"/> 8 <param format="vcf" name="input1" type="data" label="Select VCF dataset"/>