# HG changeset patch
# User anton
# Date 1410807083 14400
# Node ID 4342273027290e13ec2861fb47d81e96dd3220b6
# Parent 9f0d84b2deba150ea5c37cdcc16ead17f7989499
Uploaded
diff -r 9f0d84b2deba -r 434227302729 tool_dependencies.xml
--- a/tool_dependencies.xml Wed Jun 25 16:48:10 2014 -0400
+++ b/tool_dependencies.xml Mon Sep 15 14:51:23 2014 -0400
@@ -1,6 +1,6 @@
-
-
+
+
diff -r 9f0d84b2deba -r 434227302729 vcffixup.xml
--- a/vcffixup.xml Wed Jun 25 16:48:10 2014 -0400
+++ b/vcffixup.xml Mon Sep 15 14:51:23 2014 -0400
@@ -1,6 +1,6 @@
- vcflib
+ vcflib
Count the allele frequencies across alleles present in each record in the VCF file
vcffixup "${input1}" > "${out_file1}"
@@ -18,7 +18,7 @@
-Uses genotypes from the VCF file to correct AC (alternate allele count), AF (alternate allele frequency), NS (number of called), in the VCF records.
+Uses genotypes from the selected VCF dataset to correct AC (alternate allele count), AF (alternate allele frequency), NS (number of called), in the VCF records.
----