Mercurial > repos > anton > vcfgeno2haplo
diff test-data/vcfgeno2haplo-test1.vcf @ 0:e19406b6e652
Imported from capsule None
| author | anton |
|---|---|
| date | Wed, 11 Jun 2014 17:10:52 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/vcfgeno2haplo-test1.vcf Wed Jun 11 17:10:52 2014 -0400 @@ -0,0 +1,12 @@ +##fileformat=VCFv4.1 +##fileDate=20140610 +##source=Dan +##reference=file:///galaxy/data/phiX/sam_index/phiX.fa +##filter="AF > .001" +##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed"> +##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed"> +##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> +##FORMAT=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed"> +##FORMAT=<ID=AF,Number=.,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed"> +##FORMAT=<ID=NC,Number=.,Type=String,Description="Nucleotide and indel counts"> +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT groupA groupB