# HG changeset patch # User Anton Nekrutenko # Date 1403727489 14400 # Node ID d1ede06c0b2962c8095151c746962767dc577d87 # Parent 41f097b3d55a0a6ee8821cfd8c35fae8cfe49422 Updated to vcflib 86723982aa diff -r 41f097b3d55a -r d1ede06c0b29 tool_dependencies.xml --- a/tool_dependencies.xml Wed Jun 11 17:11:51 2014 -0400 +++ b/tool_dependencies.xml Wed Jun 25 16:18:09 2014 -0400 @@ -1,6 +1,6 @@ - - + + diff -r 41f097b3d55a -r d1ede06c0b29 vcfselectsamples.xml --- a/vcfselectsamples.xml Wed Jun 11 17:11:51 2014 -0400 +++ b/vcfselectsamples.xml Wed Jun 25 16:18:09 2014 -0400 @@ -1,6 +1,6 @@ - vcflib + vcflib Select samples from a VCF dataset vcfkeepsamples "${input1}" ${ ' '.join( map( lambda x:'"%s"' % ( x ), str($vcf_samples ).split(",") ) ) } > "${out_file1}"