Mercurial > repos > artbio > cherry_pick_fasta

diff cherry_pick_fasta.xml @ 7:6c0aefd9fee3 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit 849d6d2087dadb81f1b790e3bcb5bda40c3c83af
author artbio
date Thu, 29 Dec 2022 11:53:05 +0000
parents d8fa616a228a
children ee689b6999d5
line wrap: on
line diff
--- a/cherry_pick_fasta.xml	Fri Apr 08 16:56:42 2022 +0000
+++ b/cherry_pick_fasta.xml	Thu Dec 29 11:53:05 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="cherry_pick_fasta" name="Pick Fasta sequences" version="3.3">
+<tool id="cherry_pick_fasta" name="Pick Fasta sequences" version="4.0">
   <description>with header satisfying a string query</description>
   <requirements>
         <requirement type="package" version="3.8.0">python</requirement>
@@ -93,8 +93,6 @@
         <param name="match" value="exact" />
         <output name="output" ftype="fasta" file="output_exact.fa" />
     </test>
-
-
     <test>
         <param ftype="fasta" name="input" value="input.fa" />
         <param name="options_selector" value="textdataset" />
@@ -111,8 +109,6 @@
         <param name="match" value="exact" />
         <output name="output" ftype="fasta" file="output_alt_termlist.fa" />
     </test>
-
-
     <!-- partial matches -->
     <test>
         <param ftype="fasta" name="input" value="input.fa" />
@@ -147,5 +143,7 @@
 This tool retrieves nucleotide/peptide sequences from a fasta file whose headers match
 or do not match a given string, or a list of strings.
 
+Note that the version 4 of the tools is amazingly accelerated !
+
   </help>
 </tool>