Mercurial > repos > artbio > cpm_tpm_rpk

annotate infos.txt @ 4:be358a1ebf67 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
author artbio
date Thu, 05 Oct 2023 13:50:22 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
4
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
1 #Creation of test files
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
2
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
3 - count table : count.tab
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
4 Subset of RSEM results of Patel et al. (2014) which was aligned with hg38 CuratedRefSeq annotation.
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
5
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
6 - gene length : length_gene.tab
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
7 Feature length determined by FeatureCounts with RSEM genome bam results of Patel et al. (2014) in hg38 CuratedRefSeq annotation.
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
8
be358a1ebf67 planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cpm_tpm_rpk commit a8486c89b7ddabfb1e814c2c42f6c04d3896904c
artbio
parents:
diff changeset
9