comparison test-data/norm_table.tab @ 0:6b990f6c6ba9 draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/deseq2_normalization commit 9dfb5a5331b87d213f495febbfccff0f54becb73
author artbio
date Mon, 08 Jan 2018 04:21:24 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:6b990f6c6ba9
1 gene 2: Oocyte 1: accepted_hits 3: Oocyte 2: accepted_hits 4: Pronuclei 1: accepted_hits 5: pronuclei 2: accepted_hits 6: Pronuclei 3: accepted_hits
2 NM_001195025 0 0 0 0 0
3 NM_028778 0 0 0 0 0
4 NM_001290393 0 0 0 0 0
5 NM_008922 2951.93671402921 2054.35612169983 1927.04986963017 2951.04296142972 943.406671303357
6 NM_175370 3.7688307871423 19.8575723538648 5.89569453121117 17.7573100349287 10.3544634655247
7 NM_001290390 0 0 0 0 0
8 NM_175642 920.536919759507 1544.37755897557 853.191222873845 509.412831627018 494.713254463956
9 NM_001290392 0 0 0 0 0
10 NM_027671 0 0 0 0 0
11 NM_178884 0 0 0 2.21966375436609 3.45148782184155
12 NM_199021 312.812955332811 372.780790097552 1209.45962097418 927.819449325026 1171.2048675449
13 NM_198680 0 0 0 0 0
14 NM_011465 0 3.61046770070268 0 0 0
15 NM_130890 0 0 0 0 0
16 NM_001113393 0 0 0 0 0
17 NM_001113392 0 0 0 0 0
18 NM_001113391 17.9019462389259 2.70785077552701 74.1173026780833 16.6474781577457 35.6653741590294
19 NM_031162 0 0 0 0 0
20 NR_103716 0 0 0 0 0
21 NM_001160371 0 0 0 0 0
22 NM_177834 0.942207696785575 2.70785077552701 1.68448415177462 0 1.15049594061385
23 NM_145381 570.977864252059 401.664531703173 309.102841850643 339.608554418012 297.978448618987
24 NM_177173 0 0 0 0 0
25 NM_001160369 0 0 0 0 0
26 NM_001160370 1.88441539357115 18.9549554286891 7.58017868298579 8.87865501746437 28.7623985153463
27 NM_001289497 0 0 0 0 0
28 NM_027974 0 0 5.05345245532386 7.76882314028132 9.20396752491081
29 NM_133235 69.7233695621326 20.7601892790404 0 2.21966375436609 33.3643822778017
30 NM_028096 72.5499926524893 78.5276724902834 1.68448415177462 0 19.5584309904355
31 NM_201365 0.942207696785575 0 0 0 0
32 NM_001126046 0 0 0 0 0
33 NM_001081198 29.2084386003528 1.80523385035134 121.282858927773 27.7457969295761 57.5247970306925
34 NM_001160386 838.564850139162 1420.71904022651 1032.58878503784 690.315427607855 847.915508232408
35 NM_009418 429.646709734222 414.301168655633 651.895366736778 589.320726784197 556.840035257104
36 NM_001114663 347.674640113877 262.66152522612 297.31145278822 224.186039190975 345.148782184155
37 NM_001252070 326.003863087809 567.746045935497 389.958081135825 359.585528207307 340.5467984217
38 NR_045151 0 0 0 0 0
39 NM_001081050 87.6253158010585 56.8648662860673 29.4784726560559 68.8095763853488 78.2337239617418
40 NM_007642 0 0 0 0 0
41 NM_025728 0 0 0 0 0
42 NM_029160 0 0 0 0 0
43 NM_175210 273.240232067817 192.257405062418 291.415758257009 258.59082738365 237.002163766453
44 NM_010154 29.2084386003528 0 19.3715677454081 0 32.2138863371878
45 NM_175291 0 0 0 0 0
46 NM_010472 249.685039648177 83.9433740413374 1403.17529842826 1146.45632913009 1861.50243191321
47 NM_023314 0 0 16.8448415177462 2.21966375436609 3.45148782184155
48 NM_027456 0 0 0 0 0
49 NM_030184 4.71103848392788 1.80523385035134 9.26466283476041 0 10.3544634655247
50 NM_009183 0 0 0 0 0
51 NM_011066 37.688307871423 74.014587864405 10.1069049106477 55.4915938591523 13.8059512873662
52 NM_145519 30.1506462971384 35.2020600818512 117.913890624223 113.202851472671 159.918935745325
53 NM_173760 7580.06092063995 13724.2903472961 5817.36601815365 4487.05027945105 4067.00315006996
54 NM_172851 0 0 0 0 0
55 NM_019933 117.775962098197 1.80523385035134 45.4810720979147 118.752010858586 26.4614066341186
56 NM_176957 0 0 0 0 0
57 NM_001081756 0 0 0 0 0
58 NM_181750 1364.31674494551 611.974275269105 1390.54166728995 1895.59284622864 1614.14580468123
59 NM_019777 0 0 0 9.98848689464741 9.20396752491081
60 NM_172484 0 0 0 0 0
61 NM_028320 43.3415540521365 89.3590755923914 58.9569453121117 225.295871068158 222.045716538473
62 NM_021605 744.344080460604 563.232961309619 799.287730017057 1233.02321555036 754.725337042686
63 NM_173437 1215.44792885339 1498.34409579161 952.575787828548 1171.9824623053 1287.4049575469
64 NM_001287179 2198.17055660075 1389.12744784536 2155.29747219563 2186.3687980506 2177.88881558202
65 NM_175443 0 0 0 0 0
66 NM_007495 0 0 0 0 0
67 NM_022312 0 0 0 0 0
68 NM_001081290 2947.22567554528 1730.31664556176 1579.20389228871 1746.87537468611 1470.3338121045
69 NM_013862 74.4344080460604 41.5203785580808 198.769129909405 159.815790314359 94.3406671303357
70 NM_001205204 0 0 0 0 0
71 NM_001159525 0 0 0 0 0
72 NM_023041 0.942207696785575 1.80523385035134 1.68448415177462 0 9.20396752491081
73 NM_022563 437.184371308507 112.827115646959 359.637366403881 459.470397153781 495.86375040457
74 NM_011880 0 0 0 0 0
75 NM_026626 29.2084386003528 6.31831847622969 0 0 4.6019837624554
76 NM_001199003 0 0 0 0 0
77 NM_027188 233.667508802823 277.103396028931 302.364905243544 205.318897278863 837.561044766883
78 NM_001243792 0 0 0.84224207588731 0 0
79 NM_133684 2755.01530540102 5300.16658463154 2014.64304552245 2316.21912768102 2008.76591231178
80 NM_001011874 82.9142773171306 35.2020600818512 23.5827781248447 14.4278144033796 0
81 NM_001159750 0 0 0 0 0
82 NM_001159751 2.82662309035673 0 0 0 0
83 NM_001195662 0 0 0.84224207588731 0 0
84 NM_001177795 0 0 0 0 0
85 NM_133826 2134.10043321933 3534.64787898793 2310.27001415889 1897.81250998301 2225.05914914719
86 NM_011541 0 0 0 0 0
87 NM_021374 0 0 0 0 0
88 NM_001290372 0 0 0 0 0
89 NM_001244693 0 0 0 0 0
90 NM_001244692 0 0 0 0 0
91 NR_045189 0 0 0 0 0
92 NR_045188 0 0 0 0 0
93 NM_173868 0 0 0 0 0
94 NR_015470 58.4168772007057 83.0407571161617 182.766530467546 176.463268472104 200.18629366681
95 NM_133220 0 0 0 0 0
96 NM_145692 1.88441539357115 10.831403102108 5.05345245532386 17.7573100349287 0
97 NM_026493 34.8616847810663 83.9433740413374 8.4224207588731 3.32949563154914 103.544634655247
98 NR_110971 0 0 0 0 0
99 NM_177547 0 0 0 0 0
100 NM_029525 0 0 0 0 6.9029756436831
101 NM_001033636 10.3642846646413 21.6628062042161 9.26466283476041 14.4278144033796 13.8059512873662
102 NM_001077695 0 0 0 0 0
103 NM_001302702 0 0 0 0 0
104 NM_001081209 0 3.61046770070268 1.68448415177462 5.54915938591523 9.20396752491081
105 NM_172841 71.6077849557037 82.138140190986 475.024530800443 214.197552296328 433.736969611422
106 NM_172294 0 0 0 0 0
107 NM_001198565 0 0 0 0 0
108 NM_001198566 0 0 0 0 0
109 NM_008678 1.88441539357115 4.51308462587835 0.84224207588731 7.76882314028132 8.05347158429695
110 NM_010164 11.3064923614269 15.3444877279864 8.4224207588731 4.43932750873218 29.9128944559601
111 NM_001252192 0 0 0 0 0
112 NM_001098528 58.4168772007057 69.5015032385266 46.3233141738021 16.6474781577457 35.6653741590294
113 NM_025303 3.7688307871423 0.902616925175671 5.05345245532386 3.32949563154914 2.3009918812277
114 NM_133832 6912.97787131577 6631.52654926565 4106.77236202652 3850.00678194799 5013.86130919516
115 NM_001033288 14.1331154517836 79.430289415459 6.73793660709848 34.4047881926744 4.6019837624554
116 NM_001111272 0 0 0 0 0
117 NM_026456 1808.09657013152 1567.84559903014 2321.21916114543 2543.73466250354 3131.6499503509
118 NM_020604 32.9772693874951 16.2471046531621 22.7405360489574 0 37.9663660402571
119 NR_130314 6.59545387749903 9.92878617693238 0.84224207588731 5.54915938591523 8.05347158429695
120 NM_153154 7.5376615742846 1.80523385035134 15.1603573659716 2.21966375436609 2.3009918812277
121 NM_153179 28.2662309035673 103.800946395202 109.49146986535 280.787464927311 178.326870795147
122 NM_001077353 0 0 0 0 0
123 NM_001288617 0 0 0 0 0
124 NM_010356 0 0 0 0 0
125 NM_023872 0 0 0 0 0
126 NM_001160139 0 0 0 0 0
127 NM_183018 0 0 0 0 0
128 NM_001012623 0 0 0 0 0
129 NM_053270 0 0 0 0 0
130 NM_001012624 0 0 0 0 0
131 NM_001012625 0 0 0 0 0
132 NR_110972 0 0 0 0 0
133 NM_028534 20.7285693292827 17.1497215783377 17.6870835936335 16.6474781577457 18.4079350498216
134 NM_001290683 0 0 0 0 0
135 NM_007733 104.585054343199 216.628062042161 235.827781248447 174.243604717738 448.693416839402
136 NM_007740 0 0 0 0 0
137 NM_026719 1070.34794354841 829.504954236441 432.912427006077 524.950477907581 407.275562977303
138 NM_001290691 0 0 0 0 0
139 NM_001033764 0 0 0 0 0
140 NM_001013750 0 0 0 0 0
141 NM_177235 40.5149309617797 78.5276724902834 35.374167187267 34.4047881926744 11.5049594061385
142 NM_133833 0 0 0 0 0
143 NM_134448 0 0 0 0 0
144 NM_001276764 6.59545387749903 37.0072939322025 23.5827781248447 13.3179825261966 16.1069431685939
145 NM_183019 8.47986927107018 6.31831847622969 1.68448415177462 0 4.6019837624554
146 NM_001277076 11.3064923614269 9.92878617693238 57.2724611603371 33.2949563154914 196.734805844968
147 NM_001039551 0 0 0 0 0
148 NM_053186 0 0 0 0 0
149 NM_198006 769.783688273815 513.589030424957 854.87570702562 794.639624063061 287.623985153463
150 NM_001289766 0 0 0 0 0
151 NM_009539 0 0 0 0 0
152 NM_018872 3010.35359122991 3253.03139833312 1898.41363905 2357.28290713679 1235.63264021928
153 NM_001289765 0 0 0 0 0
154 NM_001290721 0 0 0 0 0
155 NM_001290814 14.1331154517836 13.5392538776351 279.624369194587 306.313598102521 322.138863371878
156 NM_019570 774.494726757743 1229.36425208926 459.021931358584 406.198467048995 467.101351889223
157 NM_027111 0 0 0 0 0
158 NM_207228 0 0 0 0 4.6019837624554
159 NM_001290720 1.88441539357115 0 0 0 0
160 NR_110976 29.2084386003528 59.5727170615943 30.3207147319432 39.9539475785896 43.7188457433263
161 NM_008719 545.538256438848 287.032182205863 293.942484484671 416.186953943642 541.883588029124
162 NM_018775 8497.7712173091 8221.93757142518 8542.86137572499 9098.40172914661 5428.03984781615
163 NM_145142 84.7986927107018 113.729732572135 7.58017868298579 55.4915938591523 85.1366996054249
164 NM_001123382 0 0 0 0 0
165 NM_001252202 0 0 0 0 0
166 NM_001252200 0 0 0 0 0
167 NM_001294171 0 0 0 0 0
168 NM_001252201 0.942207696785575 0.902616925175671 0 8.87865501746437 4.6019837624554
169 NM_008696 0 0 0 0 0
170 NM_008362 0 0 0 1.10983187718305 1.15049594061385
171 NM_010743 0 0 0 0 0
172 NM_001025602 0 0 0 0 0
173 NM_001033289 0 1.80523385035134 1.68448415177462 0 0
174 NR_027826 0 0 10.949146986535 7.76882314028132 0
175 NM_010879 0 1.80523385035134 0 5.54915938591523 9.20396752491081
176 NM_001013025 1500.93686097942 1049.7434839793 2191.51388145878 2291.80282638299 1963.89657062784
177 NM_023645 1869.34007042258 2217.72978515662 841.399833811423 836.813235396017 599.408385059816
178 NM_028450 179.961670086045 138.100389551878 74.9595447539706 46.6129388416879 71.3307483180587
179 NM_007737 0 0 0 0 0
180 NM_028599 2287.68028779538 2014.6409769921 2121.60778916013 1632.56269133626 1633.70423567167
181 NM_019790 32.9772693874951 228.362082069445 88.4354179681676 35.5146200698575 104.69513059586
182 NM_010863 0 0 0 0 0
183 NM_001290982 0 0 0 0 0
184 NM_001161817 0 0 0 0 0
185 NM_001142647 0 0 0 0 0
186 NM_153556 466.39280990886 198.575723538648 423.647764171317 498.314512855188 529.228132682371
187 NM_146108 0 3.61046770070268 0 4.43932750873218 0
188 NR_024590 0 0 0 0 0
189 NM_030025 23.5551924196394 21.6628062042161 44.6388300220274 2.21966375436609 31.063390396574
190 NM_172655 0 0 0 0 0
191 NM_001001883 73.4922003492749 37.9099108573782 123.809585155435 116.53234710422 135.758520992434
192 NM_001081433 12921.4363537174 10574.157278433 17312.2858698637 15852.8385336826 14189.0664355906
193 NM_031179 27011.2102514489 20387.4084889429 17647.4982160668 16894.9706663575 14438.7240547038
194 NM_139146 300.564255274599 296.960968382796 192.873435378194 311.862757488436 240.453651588295
195 NM_199007 122.487000582125 61.3779509119456 34.5319251113797 65.4800807537997 35.6653741590294
196 NM_001177867 0 0 0 0 0
197 NM_001164566 0 0 0 0 0
198 NM_025824 1555.58490739298 2608.56291375769 1288.63037610758 1499.38286607429 1570.42695893791
199 NM_023617 0 0 0 14.4278144033796 0
200 NM_144882 0 0 0 0 0
201 NM_172513 4389.74565932399 2905.52388214048 6328.60695821725 5895.42693159634 5663.89151564199
202 NM_001013771 78.2032388332027 13.5392538776351 47.1655562496894 86.5668864202776 29.9128944559601
203 NM_001033373 525.751894806351 248.219654423309 261.095043525066 371.79367885632 232.400180003998
204 NM_028717 0 0 0 0 0
205 NM_172406 8.47986927107018 152.542260354688 291.415758257009 138.728984647881 195.584309904355
206 NM_001159948 0 0 0 0 0
207 NM_175200 35.8038924778519 0.902616925175671 11.7913890624223 0 31.063390396574
208 NM_001045513 431.531125127793 628.221379922267 601.360842183539 494.985017223638 441.790441195719
209 NM_173444 418.340217372795 241.90133594708 343.634766962023 375.12317448787 651.180702387439
210 NM_139150 0 0 0 0 0
211 NM_007561 3260.98083857488 3259.34971680935 2863.62305801685 2286.25366699707 2728.97637113605
212 NM_030013 76.3188234396316 70.4041201637023 388.27359698405 287.446456190409 139.210008814276
213 NM_001037725 6604.87595446688 11362.1418541113 5709.55903244008 4867.72261332484 4680.21748641714
214 NM_001285463 0 0 0 2.21966375436609 0
215 NM_001077404 0 0 0 0 0
216 NM_001077405 0 0 0 0 0
217 NM_001077406 0 0 0 0 0
218 NM_001077407 0 0 0 0 0
219 NM_010939 0 0 0 0 0
220 NM_001077403 0 0 0 0 0
221 NR_045915 16.9597385421404 5.41570155105402 21.8982939730701 13.3179825261966 12.6554553467524
222 NM_001285937 0 0 0 0 0
223 NM_001285936 0 0 0 0 0
224 NM_001081658 0 0 0 0 0
225 NR_045914 0 0 1.68448415177462 0 0
226 NM_011780 0 0 1.68448415177462 0 2.3009918812277
227 NM_001177600 0 0 0 0 0
228 NM_009952 0 0 0 0 0
229 NM_001097644 7874.97192973384 11696.1101164263 2699.38585321883 4637.98741474795 1373.69215309294
230 NM_001039493 1502.82127637299 1353.92538776351 1311.37091215654 894.524493009535 690.29756436831
231 NM_001037726 0 0 0 0 0
232 NM_133828 0 0 0 0 0
233 NM_033563 4070.33725011369 2803.52816959563 2391.12525344407 3091.99160983197 2539.14454093477
234 NM_011086 1001.56678168307 1175.20723657872 689.796260151707 732.48903894081 702.953019715063
235 NM_139270 0 5.41570155105402 0 0 0
236 NM_175510 98.9318081624854 79.430289415459 97.700080802928 102.10453270084 285.322993272235
237 NM_021285 0 0 0 0 0
238 NM_008632 0 0 0 0 0
239 NM_001039934 0 0 0 0 0
240 NM_177645 2.82662309035673 2.70785077552701 5.05345245532386 2.21966375436609 1.15049594061385
241 NM_001122738 0 0 0 0 0
242 NM_001113387 0 0 0 0 0
243 NM_001080809 228.014262622109 211.212360491107 373.955481693966 278.567801172944 376.212172580729
244 NM_011770 174.308423905331 58.6701001364186 172.659625556899 146.497807788162 115.049594061385
245 NM_177164 129.082454459624 49.6439308846619 51.3767666291259 169.804277209006 48.3208295057817
246 NM_001276408 0 0 0 0 0
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249 NM_001276410 0 0 0 0 0
250 NM_001276409 0 0 0 0 0
251 NM_010233 0 0 0 0 0
252 NM_001276413 0 0 0 0 0
253 NM_001005423 102.700638949628 96.5800109937968 113.702680244787 125.411002121684 131.156537229979
254 NM_008342 0 0 1.68448415177462 0 0
255 NM_001045533 590.764225884556 823.186635760212 714.221280352439 689.205595730671 702.953019715063
256 NM_176980 0 6.31831847622969 5.89569453121117 12.2081506490135 0
257 NM_001170641 0 0 0 0 0
258 NM_027884 0 0 0 0 0
259 NR_045311 0 25.2732739049188 0 13.3179825261966 6.9029756436831
260 NM_001034060 0 0 0 0 0
261 NM_001289895 0 0 0 0 0
262 NM_029342 114.007131311055 91.1643094427427 520.505602898358 484.996530328991 921.547248431694
263 NM_009518 0 0 0 0 0
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266 NM_001159885 0 0 0 5.54915938591523 0
267 NM_001159883 0 0 0 0 1.15049594061385
268 NM_178055 0 0 0 0 0
269 NM_020266 0 0 0 0 0
270 NM_001014974 243.089585770678 230.167315919796 553.353043857963 744.697189589824 645.42822268437
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272 NR_037976 0 0 0 0 0
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274 NM_008781 0 18.0523385035134 0 2.21966375436609 0
275 NM_026713 0 0 0 0 0
276 NM_001159520 0 0 0 0 0
277 NM_001004173 140.388946821051 188.646937361715 38.7431354908163 35.5146200698575 79.3842199023557
278 NM_001285927 0 0 0 0 0
279 NM_009255 22024.1049123628 32404.8502307318 11439.3318747014 12352.4287930473 8666.68592064414
280 NM_172849 38.6305155682086 12.6366369524594 173.501867632786 194.220578507033 256.560594756889
281 NM_029777 0 0 0 0 0
282 NM_007735 0 0 0 0 0
283 NM_007734 136.620116033908 75.8198217147563 196.242403681743 82.1275589115454 166.821911389008
284 NM_172430 0 0 14.3181152900843 0 27.6119025747324
285 NM_133975 20776.6219218187 31148.4074708872 31377.7285371817 27961.1043137497 28666.9073522753
286 NM_152915 92.3363542849864 25.2732739049188 3.36896830354924 54.3817619819692 81.6852117835834
287 NM_001003948 2610.85752779283 4962.58785461584 2460.18910366683 2026.55300773624 1568.12596705668
288 NM_001081746 16.0175308453548 4.51308462587835 9.26466283476041 9.98848689464741 17.2574391092078
289 NM_013673 28.2662309035673 207.601892790404 58.9569453121117 37.7342838242236 65.5782686149895
290 NM_001144993 0 0 0 0 0
291 NM_001144992 0 0 0 0 0
292 NM_001172157 0 0 0 0 0
293 NM_001081082 0 0 0 0 0
294 NM_008801 237.436339589965 240.096102096728 939.099914614351 772.4429865194 1785.5696998327
295 NM_153530 0 0 0 0 0
296 NM_201644 0 0 0 0 0
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