# HG changeset patch
# User artbio
# Date 1731002087 0
# Node ID 71a9c73d989a12b9b766e3fb7127a905122169a9
# Parent  8faa01102fbc6a7cfe19c427ca9c43e923784993
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/deseq2_normalization commit a4201d38a9ceba983fa0b800dff981bd3a626866

diff -r 8faa01102fbc -r 71a9c73d989a deseq2_normalization.xml
--- a/deseq2_normalization.xml	Sat Oct 14 18:00:34 2023 +0000
+++ b/deseq2_normalization.xml	Thu Nov 07 17:54:47 2024 +0000
@@ -1,5 +1,5 @@
-<tool id="deseq2_normalization" name="DESeq2 normalization" version="1.40.2+galaxy0" profile="22.01">
-	<description>of hit lists (geometric method)</description>
+<tool id="deseq2_normalization" name="DESeq2 normalization" version="1.40.2+galaxy1" profile="22.01">
+    <description>of hit lists (geometric method)</description>
     <requirements>
       <requirement type="package" version="1.40.2">bioconductor-deseq2</requirement>
     </requirements>
@@ -31,13 +31,13 @@
                   quote = FALSE, dec = ".", sep = "\t", eol = "\n")
         </configfile>
     </configfiles>
-	<inputs>
-		<param name="input" type="data" format="tabular" label="Hit lists of items"/>
-	</inputs>
-	<outputs>
+    <inputs>
+        <param name="input" type="data" format="tabular" label="Hit lists of items"/>
+    </inputs>
+    <outputs>
                 <data name="output_factors" format="tabular" label="Normalization Factors (Geometric mean method)" />
                 <data name="norm_hit_table" format="tabular" label="Normalized Hit Table (Geometric mean method)" />
-	</outputs>
+    </outputs>
     <tests>
         <test>
             <param name="input" value="counts.tab" ftype="tabular"/>
@@ -106,8 +106,6 @@
 NM_145381	606	445	367	306
 
 ]]>
-
-
     </help>
     <citations>
         <citation type="doi">10.1186/s13059-014-0550-8</citation>