Mercurial > repos > artbio > deseq2_normalization
changeset 3:71a9c73d989a draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/deseq2_normalization commit a4201d38a9ceba983fa0b800dff981bd3a626866
| author | artbio |
|---|---|
| date | Thu, 07 Nov 2024 17:54:47 +0000 |
| parents | 8faa01102fbc |
| children | |
| files | deseq2_normalization.xml |
| diffstat | 1 files changed, 7 insertions(+), 9 deletions(-) [+] |
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--- a/deseq2_normalization.xml Sat Oct 14 18:00:34 2023 +0000 +++ b/deseq2_normalization.xml Thu Nov 07 17:54:47 2024 +0000 @@ -1,5 +1,5 @@ -<tool id="deseq2_normalization" name="DESeq2 normalization" version="1.40.2+galaxy0" profile="22.01"> - <description>of hit lists (geometric method)</description> +<tool id="deseq2_normalization" name="DESeq2 normalization" version="1.40.2+galaxy1" profile="22.01"> + <description>of hit lists (geometric method)</description> <requirements> <requirement type="package" version="1.40.2">bioconductor-deseq2</requirement> </requirements> @@ -31,13 +31,13 @@ quote = FALSE, dec = ".", sep = "\t", eol = "\n") </configfile> </configfiles> - <inputs> - <param name="input" type="data" format="tabular" label="Hit lists of items"/> - </inputs> - <outputs> + <inputs> + <param name="input" type="data" format="tabular" label="Hit lists of items"/> + </inputs> + <outputs> <data name="output_factors" format="tabular" label="Normalization Factors (Geometric mean method)" /> <data name="norm_hit_table" format="tabular" label="Normalized Hit Table (Geometric mean method)" /> - </outputs> + </outputs> <tests> <test> <param name="input" value="counts.tab" ftype="tabular"/> @@ -106,8 +106,6 @@ NM_145381 606 445 367 306 ]]> - - </help> <citations> <citation type="doi">10.1186/s13059-014-0550-8</citation>