Mercurial > repos > artbio > gatk4

comparison macros.xml @ 2:646e6943bcd2 draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/gatk4 commit 9c42369510cce59bf0dcb0edb440322d17b18339
author artbio
date Sun, 15 Oct 2023 12:06:24 +0000
parents b040adcfeefd
children
comparison
equal deleted inserted replaced
1:b040adcfeefd 2:646e6943bcd2
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@VERSION@">4.1.7.0</token> 3 <token name="@VERSION@">4.1.7.0</token>
4 <token name="@WRAPPER_VERSION@">@VERSION@+galaxy2</token> 4 <token name="@WRAPPER_VERSION@">@VERSION@+galaxy3</token>
5 5
6 <xml name="requirements"> 6 <xml name="requirements">
7 <requirements> 7 <requirements>
8 <requirement type="package" version="@VERSION@">gatk4</requirement> 8 <requirement type="package" version="@VERSION@">gatk4</requirement>
9 <requirement type="package" version="0.2.5">tabix</requirement> 9 <requirement type="package" version="0.2.5">tabix</requirement>
601 <filter>not gzipped_output</filter> 601 <filter>not gzipped_output</filter>
602 </data> 602 </data>
603 <data format="vcf_bgzip" name="output_vcf_bgzip" label="${tool.name} on ${on_string}: vcf_bgzip" from_work_dir="output.vcf.gz" > 603 <data format="vcf_bgzip" name="output_vcf_bgzip" label="${tool.name} on ${on_string}: vcf_bgzip" from_work_dir="output.vcf.gz" >
604 <filter>gzipped_output</filter> 604 <filter>gzipped_output</filter>
605 </data> 605 </data>
606 <data format="tabular" name="output_vcf_bgzip_stats" label="gatk vcf stats" from_work_dir="output.vcf.gz.stats" > 606 <data format="tabular" name="output_vcf_bgzip_stats" label="gatk vcf.gz stats" from_work_dir="output.vcf.gz.stats" >
607 <filter>gzipped_output</filter> 607 <filter>gzipped_output</filter>
608 </data> 608 </data>
609 </xml> 609 </xml>
610 610
611 611