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comparison center_scale.xml @ 2:163befe5f05b draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/gsc_center_scale commit 41ba5435a8ad12c1fe0703a9ce44b759003f3f73
author artbio
date Sun, 15 Oct 2023 16:16:16 +0000
parents a96cc346819c
children b7daf62bde65
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1:a96cc346819c 2:163befe5f05b
1 <tool id="center_scale" name="Center or scale (standardize) data" version="0.9.5"> 1 <tool id="center_scale" name="Center or scale (standardize) data" version="4.3.1+galaxy0" profile="21.01">
2 <description></description> 2 <description></description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.6.0">r-optparse</requirement> 4 <requirement type="package" version="1.7.3">r-optparse</requirement>
5 </requirements> 5 </requirements>
6 <stdio> 6 <stdio>
7 <exit_code range="1:" level="fatal" description="Tool exception" /> 7 <exit_code range="1:" level="fatal" description="Tool exception" />
8 </stdio> 8 </stdio>
9 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
92 **What it does** 92 **What it does**
93 93
94 The tool perform various normalization operations on a data table, including mean centering, 94 The tool perform various normalization operations on a data table, including mean centering,
95 standard deviation rescaling, or both (standardization). 95 standard deviation rescaling, or both (standardization).
96 96
97 In addition, these operations can be performed on subsets of observations, is the user provides 97 In addition, these operations can be performed on subsets of observations, if the user provides
98 a two-column table that maps observations to groups (factor levels). 98 a two-column table that maps observations to groups (factor levels).
99 99
100 **Inputs** 100 **Inputs**
101 101
102 A data table with observations (samples, library sequencings) in columns (library names 102 A data table with observations (samples, library sequencings) in columns (library names