Mercurial > repos > artbio > gsc_cpm_tpm_rpk

comparison cpm_tpm_rpk.xml @ 1:46507a10106c draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gsc_cpm_tpm_rpk commit 06c8d40814f68cbf4d24b2ea70a11407bc40d072
author artbio
date Mon, 24 Jun 2019 19:15:51 -0400
parents ce3d027ec26b
children
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0:ce3d027ec26b 1:46507a10106c
1 <tool id="cpm_tpm_rpk" name="Generate CPM, TPM, RPK" version="0.9.0"> 1 <tool id="cpm_tpm_rpk" name="Generate CPM, TPM, RPK" version="0.9.1">
2 <description>from raw counts expression values</description> 2 <description>from raw counts expression values</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.6.0">r-optparse</requirement> 4 <requirement type="package" version="1.6.0">r-optparse</requirement>
5 </requirements> 5 </requirements>
6 <stdio> 6 <stdio>
74 <option value="FALSE" selected="true">No</option> 74 <option value="FALSE" selected="true">No</option>
75 <option value="TRUE">Yes</option> 75 <option value="TRUE">Yes</option>
76 </param> 76 </param>
77 </inputs> 77 </inputs>
78 <outputs> 78 <outputs>
79 <data name="output" format="tabular" label="${option.type_transfo} from ${on_string}"> 79 <data name="output" format="tabular" label="${option.type_transfo} of ${on_string}">
80 <filter>log == "FALSE"</filter> 80 <filter>log == "FALSE"</filter>
81 </data> 81 </data>
82 <data name="output_log" format="tabular" label="log2(${option.type_transfo} +1) from ${on_string}"> 82 <data name="output_log" format="tabular" label="log2(${option.type_transfo} +1) of ${on_string}">
83 <filter>log == "TRUE"</filter> 83 <filter>log == "TRUE"</filter>
84 </data> 84 </data>
85 </outputs> 85 </outputs>
86 <tests> 86 <tests>
87 <test> 87 <test>