diff test-data/result_from_csv.tsv @ 4:6916ac5a9ef0 draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/gsc_mannwhitney_de commit c394391dcf541d91ee1dfdc0c3d80cd7a21942ff
author artbio
date Thu, 30 Nov 2023 02:03:53 +0000
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/result_from_csv.tsv	Thu Nov 30 02:03:53 2023 +0000
@@ -0,0 +1,1001 @@
+genes	mean	SD	Variance	Percentage_Detection	mean_condition2	mean_condition1	log2FC	statistic	p.value	p.adjust	Significant
+CHTOP	3.8234613519	3.84537289419585	14.7868926954161	55	7.93857243409091	2.66278899538462	5.27578343870629	221	2.77104282187417e-08	1.38552141093708e-05	UP
+GALNS	2.2481162207	3.51579961231222	12.3608469139348	32	6.08584531863636	1.16567980846154	4.92016551017482	298.5	1.93694184665631e-08	1.38552141093708e-05	UP
+ACAD9	3.6175666278	3.92373892857361	15.395727179604	50	7.65313508727273	2.47932937	5.17380571727273	252.5	7.38169087242701e-08	1.70542874108158e-05	UP
+PPP1CA	5.5439969757	4.24633823493944	18.0313884055086	68	9.56443781545454	4.4100264824359	5.15441133301865	216	5.71634864068665e-08	1.70542874108158e-05	UP
+QSOX1	1.4023561952	2.80910384050578	7.89106438674434	23	4.37727818863636	0.563275632948718	3.81400255568765	383	8.52714370540792e-08	1.70542874108158e-05	UP
+CALR	6.1332206259	3.74330853958279	14.0123588225134	82	9.46178946409091	5.19439351769231	4.2673959463986	228	1.49386785685187e-07	2.13409693835981e-05	UP
+STT3A	5.236738824	3.62605148242273	13.1482493531801	73	8.46855458454545	4.32520104538462	4.14335353916084	230	1.33870514441858e-07	2.13409693835981e-05	UP
+CHUK	0.8719910028	2.46162223204938	6.05958401331976	13	3.16185595909091	0.226131656153846	2.93572430293706	497	2.85188510211347e-07	3.56485637764184e-05	UP
+CPNE4	0.526141333	1.86358339179453	3.47294305817242	9	2.32411542863636	0.0190204342307692	2.30509499440559	553	3.32791497459475e-07	3.69768330510528e-05	UP
+CDKN2A	7.6964229078	3.10484757262992	9.6400784492659	92	10.2291212545455	6.98207209205128	3.24704916249417	248	3.91842117256886e-07	3.91842117256886e-05	UP
+LPHN2	0.651253002	2.13715406340722	4.56742749073799	9	2.65581755227273	0.0858630006410256	2.5699545516317	557	4.73339607180964e-07	4.30308733800876e-05	UP
+BOD1	3.1497567495	3.83739924686455	14.7256329798366	43	6.73838572045454	2.1375793474359	4.60080637301865	320	7.2464212338475e-07	5.17325024039576e-05	UP
+L3MBTL4	0.9526289915	2.43611634678434	5.93466285506989	16	3.04302798727273	0.36302927474359	2.67999871252914	478.5	7.75987536059364e-07	5.17325024039576e-05	UP
+RAB11FIP2	1.1953109236	2.4244277791648	5.87785005638597	22	3.54252472954545	0.533276260384615	3.00924846916084	424.5	6.68529681059636e-07	5.17325024039576e-05	UP
+TMED2	4.8793516487	4.43931839493608	19.7075478116179	58	8.71889055227273	3.79640477846154	4.92248577381119	286	7.73621573695859e-07	5.17325024039576e-05	UP
+CDC23	1.4845877429	2.93586935370758	8.61932886203936	23	4.03794072045455	0.764411262051282	3.27352945840326	422	8.85938244801212e-07	5.42768494562811e-05	UP
+KPNA6	4.2484375509	3.96585005887565	15.727966689484	60	7.92728396	3.21081420474359	4.71646975525641	288	9.68141352346355e-07	5.42768494562811e-05	UP
+MRPS15	3.4301327823	3.80590294950846	14.4848972610772	48	6.82621584818182	2.47226319961538	4.35395264856643	312	9.76983290213059e-07	5.42768494562811e-05	UP
+P4HB	6.4598457483	4.16631767129325	17.3582029381304	75	9.84999056590909	5.50365105615385	4.34633950975524	279	1.22440375342796e-06	6.1220187671398e-05	UP
+PDIA3	5.8247363125	3.87278033056344	14.9984274887991	78	9.02030213909091	4.92342287423077	4.09687926486014	277	1.19671614202614e-06	6.1220187671398e-05	UP
+GUK1	7.5341423268	3.66254878000738	13.4142635659336	86	10.2908856654545	6.75659933384615	3.53428633160839	281	1.55859949560046e-06	7.08454316182027e-05	UP
+NIPSNAP1	1.5822353837	3.00392732829468	9.02357939367564	25	4.27341426090909	0.823184931153846	3.45022932975524	418.5	1.55424820873594e-06	7.08454316182027e-05	UP
+ATL3	1.684943722	3.06419654740369	9.38930048112069	28	4.27152092409091	0.955396306025641	3.31612461806527	406.5	2.13583627347771e-06	7.35991999095773e-05	UP
+AXL	1.8516205135	2.99984696420088	8.99908180862526	33	4.53106485	1.09587980320513	3.43518504679487	380	2.02019519292425e-06	7.35991999095773e-05	UP
+C20orf27	2.2550394962	3.30651005019324	10.9330087120289	35	5.24810855863636	1.41084052987179	3.83726802876457	373	2.20797599728732e-06	7.35991999095773e-05	UP
+HLA-H	3.8735612069	2.42049880894429	5.85881448410071	84	5.92932852318182	3.29372939974359	2.63559912343823	288	2.04941309962595e-06	7.35991999095773e-05	UP
+PIPSL	0.3561897782	0.939000320296682	0.881721601517272	15	1.27283279909091	0.097649438974359	1.17518336011655	504	2.1896668042747e-06	7.35991999095773e-05	UP
+RNASEH2C	3.0358882367	3.56320614394236	12.6964380242285	46	6.25070514681818	2.12914500564103	4.12156014117716	331	1.81742821143313e-06	7.35991999095773e-05	UP
+RNF121	0.8560453439	2.23096200145959	4.97719145195658	14	2.70515350727273	0.334502015769231	2.3706514915035	512	1.88588723988853e-06	7.35991999095773e-05	UP
+ST3GAL4	0.5486586308	1.79448070273693	3.22016099249524	10	2.24377795363636	0.0705480525641026	2.17322990107226	560	1.98345400865354e-06	7.35991999095773e-05	UP
+CD59	6.49773314	4.36512404918497	19.054307964773	76	10.1743009872727	5.4607524651282	4.71354852214452	297	2.64791864695645e-06	7.78799602046015e-05	UP
+HLA-A	8.2865820731	3.64304633166698	13.2717865746723	90	10.9205976854545	7.54365459269231	3.37694309276224	293	2.60817317948876e-06	7.78799602046015e-05	UP
+HLA-C	7.4623184726	2.95665852674508	8.74182964377442	94	9.70672850227273	6.82927974628205	2.87744875599068	291	2.42531382714612e-06	7.78799602046015e-05	UP
+PPIL3	2.3487333639	3.61673583034686	13.0807780665148	32	5.53410304045455	1.45029576282051	4.08380727763403	389	2.50032947945218e-06	7.78799602046015e-05	UP
+MEIS1	1.1417200766	2.54953386014947	6.50012290404868	19	3.09222802	0.591576810512821	2.50065120948718	472	2.7862062978764e-06	7.960589422504e-05	UP
+ILF2	5.0831839688	4.2143184141535	17.7604796958732	64	8.81065583772727	4.03184574935897	4.7788100883683	308.5	2.88883804801329e-06	8.02455013337025e-05	UP
+EAF1	1.9721108685	3.11516010125986	9.70422245648135	33	4.66495198454545	1.21259157935897	3.45236040518648	391	3.4515752787676e-06	9.32858183450703e-05	UP
+TMED9	3.348143585	4.0431690228795	16.3472157475724	43	6.90214055863636	2.34573418217949	4.55640637645688	356	3.78604509887421e-06	9.96327657598476e-05	UP
+MICAL2	0.3680415007	1.27902469685992	1.6359041751776	8	1.45944048181818	0.0602110188461538	1.39922946297203	596.5	3.90613545703125e-06	0.000100157319411058	UP
+FKBP3	4.4140737755	4.07565240545291	16.6109425300741	58	7.9874323	3.4062034224359	4.5812288775641	324.5	4.0460551960326e-06	0.000101151379900815	UP
+RPS3	7.1340827081	3.62294359419707	13.1257202867336	86	9.94925286727273	6.34006035551282	3.60919251175991	305	4.15228858844448e-06	0.000101275331425475	UP
+UBE2L6	4.7574890178	4.37988683391794	19.1834086779278	60	8.45294147318182	3.715181915	4.73775955818182	323	4.28644172264496e-06	0.000102058136253451	UP
+APOPT1	3.0650373167	3.57294047431652	12.7659036330092	46	6.13314342181818	2.19967405628205	3.93346936553613	351	4.40248659813421e-06	0.000102383409258935	UP
+CD63	9.7227936406	3.48160287796844	12.1215585998781	91	11.9100736927273	9.10586849769231	2.80420519503497	308	4.78517915029934e-06	0.000102700509462485	UP
+NF2	1.6099662655	3.18861910471301	10.1672917949408	23	4.26902294545455	0.859975919871795	3.40904702558275	453	4.98246305945622e-06	0.000102700509462485	UP
+NUP37	1.1656175783	2.63634361016076	6.95030763083549	20	3.24361461863636	0.579515848974359	2.664098769662	474.5	5.0682010802303e-06	0.000102700509462485	UP
+OGFOD1	2.164808847	3.42145696215704	11.7063677438929	36	5.24930179863636	1.29482365551282	3.95447814312354	386	4.94132799030433e-06	0.000102700509462485	UP
+PACS1	2.5593869681	3.18935255869196	10.171969743635	47	5.39028801227273	1.76092769923077	3.62936031304196	352	5.13502547312426e-06	0.000102700509462485	UP
+TXNDC5	1.2194369805	2.24584974380027	5.04384107172775	24	3.17178878772727	0.66877365025641	2.50301513747086	445.5	4.72060928088598e-06	0.000102700509462485	UP
+ZFYVE27	0.7222309277	2.2043566157992	4.8591880896177	10	2.54745433272727	0.207424326282051	2.34003000644522	572	5.03556840947753e-06	0.000102700509462485	UP
+IFNGR1	3.1344741029	3.7981574329961	14.4259998858235	48	6.49070899727273	2.18784374807692	4.3028652491958	350.5	5.34789027190946e-06	0.000102991816000513	UP
+WDR73	2.1457651846	3.55067287788115	12.6072778857208	30	5.37997830227273	1.23355122833333	4.14642707393939	414.5	5.42657881516407e-06	0.000102991816000513	UP
+YBX1	4.9847906147	3.26686823982417	10.6724280963719	81	7.69218441772727	4.22116672153846	3.47101769618881	313	5.45856624802717e-06	0.000102991816000513	UP
+CMPK1	3.8171695264	3.74387444256968	14.0165958417264	56	6.93193010045455	2.93864731320513	3.99328278724942	335.5	5.59463990707975e-06	0.000103604442723699	UP
+RBM15	0.9413536332	2.02774866423448	4.11176464530471	21	2.70873459045455	0.442861568333333	2.26587302212121	470	5.94372052993198e-06	0.000106137866605928	UP
+SDHAF1	1.4227148038	2.99243160354964	8.95464690192265	20	3.87431470045455	0.731237909871795	3.14307679058275	477	5.83893854387327e-06	0.000106137866605928	UP
+KATNB1	1.3993313888	2.86646123246792	8.21659999724149	21	3.87092624636364	0.70221489051282	3.16871135585082	471	6.28121769462517e-06	0.000110196801660091	UP
+LOC100859930	1.9257651442	3.21723291572509	10.3505876340249	29	4.78784368	1.11851222384615	3.66933145615385	423	6.42743935455374e-06	0.000110817919906099	UP
+IPO11	1.8455186391	2.96197217896766	8.7732791889784	32	4.27367958363636	1.16065273166667	3.1130268519697	409	6.57206325172244e-06	0.000111390902571567	UP
+C11orf73	3.4413149701	3.97236284707814	15.7796665888468	46	6.64713526	2.53710924730769	4.11002601269231	361.5	6.91677071868487e-06	0.000113389683912867	UP
+CD47	4.123620876	4.00857391251895	16.0686648121275	57	7.67025641227273	3.12328777602564	4.54696863624709	339	6.89906420006577e-06	0.000113389683912867	UP
+ACTR6	1.8822280909	3.27775196351704	10.7436579343398	27	4.55733992954545	1.12770936717949	3.42963056236597	440	8.81880432555217e-06	0.000120703135270085	UP
+APOL2	1.8917980405	2.91621482988888	8.50430893406381	38	4.52012737227273	1.15047438282051	3.36965298945221	389	7.94252885875396e-06	0.000120703135270085	UP
+ARHGDIA	3.3495296366	2.98072174615515	8.88470212800222	64	5.74047518272727	2.67516038	3.06531480272727	336.5	8.99782911336286e-06	0.000120703135270085	UP
+ATIC	3.1367004903	4.03311809707776	16.2660415849761	41	6.64181604818182	2.14807815346154	4.49373789472028	380	8.30688516998111e-06	0.000120703135270085	UP
+C12orf52	1.0643673872	2.56662756384725	6.58757705150049	17	2.89848169227273	0.547053096025641	2.35142859624709	506	7.84227923045986e-06	0.000120703135270085	UP
+CFL1	9.2358671098	2.94187262358221	8.65461453338248	95	11.1409248954545	8.69854311897436	2.44238177648019	323	8.6755011616408e-06	0.000120703135270085	UP
+CYB5R3	3.3163207398	3.55049261656473	12.6059978202807	51	6.39953339818182	2.44669665666667	3.95283674151515	357	9.27207431355853e-06	0.000120703135270085	UP
+GNAS	7.8256408146	3.04552675389518	9.27523320869128	92	9.96583489227273	7.22199633115385	2.74383856111888	321	7.99521685470957e-06	0.000120703135270085	UP
+HRAS	2.667916757	3.38193892936746	11.4375109219711	42	5.4667242	1.87850952948718	3.58821467051282	377	8.3337842982406e-06	0.000120703135270085	UP
+NIPA2	2.3852796338	3.50561478473686	12.2893350189657	35	5.30425929409091	1.56197767833333	3.74228161575758	403	8.98321123765549e-06	0.000120703135270085	UP
+PLD3	5.1554176555	4.01087262813166	16.0870992390958	70	8.42985234863636	4.23185915230769	4.19799319632867	327.5	7.79297669399279e-06	0.000120703135270085	UP
+REEP3	2.3137890988	3.18265804448027	10.1293122280949	40	4.969569375	1.56472286705128	3.40484650794872	385.5	9.18499407996532e-06	0.000120703135270085	UP
+SEC11A	2.7301443123	3.68879422596787	13.6072028415339	40	5.84475895954545	1.85166325794872	3.99309570159674	384.5	8.79253399819626e-06	0.000120703135270085	UP
+SEC61A1	5.9674670564	3.92997753873496	15.4447234549613	77	8.64800905590909	5.21141674884615	3.43659230706294	325	8.27056962255869e-06	0.000120703135270085	UP
+SLC44A1	2.6752027894	3.75653532587257	14.1115576545285	37	5.77884958272727	1.79981523230769	3.97903435041958	395	8.83816625180303e-06	0.000120703135270085	UP
+TOMM22	2.1241077592	3.30883229372362	10.9483711479883	33	4.931264865	1.33234549858974	3.59891936641026	412	9.29414141579653e-06	0.000120703135270085	UP
+RHOC	7.2318520828	3.77447811928967	14.2466850729965	85	9.97138986818182	6.45916193820513	3.51222792997669	326	9.42252729199623e-06	0.00012080163194867	UP
+CLIC4	7.9409392376	3.62089089709227	13.1108508886456	89	10.65859985	7.17441957769231	3.48418027230769	326	9.62233787013735e-06	0.000121753790442828	UP
+DRG1	2.4452807443	3.66598787902883	13.4394671291863	35	5.54983557545455	1.56963707397436	3.98019850148019	405	9.83524643840212e-06	0.000121753790442828	UP
+HLA-G	1.0028101613	1.30841893429601	1.71196010762431	45	2.15632008681818	0.677461207948718	1.47885887886946	372.5	9.86205702586904e-06	0.000121753790442828	UP
+ANXA2P2	1.8085089617	2.1650742478855	4.68754649885697	49	3.70269657	1.27425091833333	2.42844565166667	364	1.03761576483114e-05	0.000122490875351324	UP
+CANX	6.9172880623	3.68862366179204	13.6059445183321	84	9.34080291818182	6.2337325901282	3.10707032805361	330.5	1.11233461053562e-05	0.000122490875351324	UP
+CKS2	2.2511777677	3.49963934684524	12.2474755579874	32	5.20074130863636	1.41924958948718	3.78149171914918	420.5	1.12555651902303e-05	0.000122490875351324	UP
+CYTH2	3.1084047983	3.60811222616039	13.0184738365681	49	6.09076054727273	2.26722753576923	3.8235330115035	366	1.12691605323218e-05	0.000122490875351324	UP
+FUCA2	2.488334572	3.63354205897111	13.202627894312	35	5.65676892454545	1.59467360076923	4.06209532377622	408	1.12594516025193e-05	0.000122490875351324	UP
+HK1	1.9382471911	3.23662408771296	10.4757354851638	31	4.867357935	1.11208775051282	3.75527018448718	425	1.12504694252753e-05	0.000122490875351324	UP
+HLA-B	8.3336770817	2.90321335827598	8.42864780367207	97	10.4337615163636	7.74134557448718	2.69241594187646	327	1.01337113655017e-05	0.000122490875351324	UP
+ICAM1	2.8126989918	4.10019341200262	16.8115860158297	36	6.34296945863636	1.81698168064103	4.52598777799534	403	1.0696613555113e-05	0.000122490875351324	UP
+PRDX6	7.2261045416	3.58157044370317	12.8276468432081	86	9.89479532863636	6.47339688371795	3.42139844491841	329	1.06445684423209e-05	0.000122490875351324	UP
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