Mercurial > repos > artbio > manta

comparison manta_macros.xml @ 6:cb5691381acb draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/manta commit 01bc6749826f5ef4a22540a9aa6a5ffd93786d4c
author artbio
date Thu, 08 Jun 2023 17:36:38 +0000
parents f55d45b0c6d1
children 555971edd46e
comparison
equal deleted inserted replaced
5:f55d45b0c6d1 6:cb5691381acb
1 <macros> 1 <macros>
2 2
3 <token name="@VERSION@">1.6</token> 3 <token name="@TOOL_VERSION@">1.6</token>
4 <token name="@WRAPPER_VERSION@">@VERSION@+galaxy7</token> 4 <token name="@VERSION_SUFFIX@">8</token>
5 <token name="@pipefail@"><![CDATA[set -o | grep -q pipefail && set -o pipefail;]]></token> 5 <token name="@pipefail@"><![CDATA[set -o | grep -q pipefail && set -o pipefail;]]></token>
6 6
7 <token name="@set_reference_fasta_filename@"><![CDATA[ 7 <token name="@set_reference_fasta_filename@"><![CDATA[
8 #set $reference_fasta_filename = "localref.fa" 8 #set $reference_fasta_filename = "localref.fa"
9 9
27 27
28 28
29 <xml name="requirements"> 29 <xml name="requirements">
30 <requirements> 30 <requirements>
31 <requirement type="package" version="1.7">samtools</requirement> 31 <requirement type="package" version="1.7">samtools</requirement>
32 <requirement type="package" version="@VERSION@">manta</requirement> 32 <requirement type="package" version="@TOOL_VERSION@">manta</requirement>
33 </requirements> 33 </requirements>
34 </xml> 34 </xml>
35 35
36 <xml name="stdio"> 36 <xml name="stdio">
37 <stdio> 37 <stdio>