Mercurial > repos > artbio > metavisitor_2_workflows
comparison Galaxy-Workflow-Metavisitor__Workflow_for_proteic_vir2_generation.ga @ 0:c375489bbcb0 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/workflows/metavisitor_2_workflows commit ecf95caa7d5e9ab001a75cbf5fb306e7ecd3def3
author | artbio |
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date | Sun, 21 Jul 2019 19:22:52 -0400 |
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-1:000000000000 | 0:c375489bbcb0 |
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1 { | |
2 "a_galaxy_workflow": "true", | |
3 "uuid": "224bad2a-247c-492d-b0ab-7d4ca6241d90", | |
4 "tags": [], | |
5 "format-version": "0.1", | |
6 "version": 0, | |
7 "steps": { | |
8 "0": { | |
9 "tool_id": "toolshed.g2.bx.psu.edu/repos/artbio/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/2.3.0", | |
10 "errors": null, | |
11 "uuid": "9c3e474c-3e57-4378-a5cc-ef9c6b7b092a", | |
12 "tool_version": "2.3.0", | |
13 "outputs": [ | |
14 { | |
15 "type": "fasta", | |
16 "name": "outfile" | |
17 }, | |
18 { | |
19 "type": "txt", | |
20 "name": "logfile" | |
21 } | |
22 ], | |
23 "post_job_actions": { | |
24 "RenameDatasetActionoutfile": { | |
25 "output_name": "outfile", | |
26 "action_type": "RenameDatasetAction", | |
27 "action_arguments": { | |
28 "newname": "Vir2" | |
29 } | |
30 } | |
31 }, | |
32 "workflow_outputs": [ | |
33 { | |
34 "output_name": "outfile", | |
35 "uuid": "c65e9a65-8c83-4caa-930a-347711a3e030", | |
36 "label": null | |
37 }, | |
38 { | |
39 "output_name": "logfile", | |
40 "uuid": "990bc867-6319-4e49-825c-72093dbd7b14", | |
41 "label": null | |
42 } | |
43 ], | |
44 "annotation": "", | |
45 "content_id": "toolshed.g2.bx.psu.edu/repos/artbio/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/2.3.0", | |
46 "input_connections": {}, | |
47 "inputs": [], | |
48 "position": { | |
49 "top": 275, | |
50 "left": 261 | |
51 }, | |
52 "tool_state": "{\"__page__\": null, \"__rerun_remap_job_id__\": null, \"queryString\": \"\\\"txid10239[Organism] NOT txid131567[Organism] NOT phage[All Fields] NOT patent[All Fields] NOT chimeric[Title] NOT vector[Title] NOT method[Title] NOT X174[All Fields] AND 30:9000[Sequence length]\\\"\", \"dbname\": \"\\\"protein\\\"\", \"dry_run\": \"\\\"false\\\"\"}", | |
53 "label": "Vir2", | |
54 "type": "tool", | |
55 "id": 0, | |
56 "tool_shed_repository": { | |
57 "owner": "artbio", | |
58 "changeset_revision": "c667d0ee39f5", | |
59 "name": "fetch_fasta_from_ncbi", | |
60 "tool_shed": "toolshed.g2.bx.psu.edu" | |
61 }, | |
62 "name": "Retrieve FASTA from NCBI" | |
63 } | |
64 }, | |
65 "annotation": "", | |
66 "name": "Metavisitor: Workflow for proteic vir2 generation" | |
67 } |