Mercurial > repos > artbio > metavisitor_2_workflows

comparison Galaxy-Workflow-Metavisitor__Workflow_for_proteic_vir2_generation.ga @ 0:c375489bbcb0 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/workflows/metavisitor_2_workflows commit ecf95caa7d5e9ab001a75cbf5fb306e7ecd3def3
author artbio
date Sun, 21 Jul 2019 19:22:52 -0400
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-1:000000000000 0:c375489bbcb0
1 {
2 "a_galaxy_workflow": "true",
3 "uuid": "224bad2a-247c-492d-b0ab-7d4ca6241d90",
4 "tags": [],
5 "format-version": "0.1",
6 "version": 0,
7 "steps": {
8 "0": {
9 "tool_id": "toolshed.g2.bx.psu.edu/repos/artbio/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/2.3.0",
10 "errors": null,
11 "uuid": "9c3e474c-3e57-4378-a5cc-ef9c6b7b092a",
12 "tool_version": "2.3.0",
13 "outputs": [
14 {
15 "type": "fasta",
16 "name": "outfile"
17 },
18 {
19 "type": "txt",
20 "name": "logfile"
21 }
22 ],
23 "post_job_actions": {
24 "RenameDatasetActionoutfile": {
25 "output_name": "outfile",
26 "action_type": "RenameDatasetAction",
27 "action_arguments": {
28 "newname": "Vir2"
29 }
30 }
31 },
32 "workflow_outputs": [
33 {
34 "output_name": "outfile",
35 "uuid": "c65e9a65-8c83-4caa-930a-347711a3e030",
36 "label": null
37 },
38 {
39 "output_name": "logfile",
40 "uuid": "990bc867-6319-4e49-825c-72093dbd7b14",
41 "label": null
42 }
43 ],
44 "annotation": "",
45 "content_id": "toolshed.g2.bx.psu.edu/repos/artbio/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/2.3.0",
46 "input_connections": {},
47 "inputs": [],
48 "position": {
49 "top": 275,
50 "left": 261
51 },
52 "tool_state": "{\"__page__\": null, \"__rerun_remap_job_id__\": null, \"queryString\": \"\\\"txid10239[Organism] NOT txid131567[Organism] NOT phage[All Fields] NOT patent[All Fields] NOT chimeric[Title] NOT vector[Title] NOT method[Title] NOT X174[All Fields] AND 30:9000[Sequence length]\\\"\", \"dbname\": \"\\\"protein\\\"\", \"dry_run\": \"\\\"false\\\"\"}",
53 "label": "Vir2",
54 "type": "tool",
55 "id": 0,
56 "tool_shed_repository": {
57 "owner": "artbio",
58 "changeset_revision": "c667d0ee39f5",
59 "name": "fetch_fasta_from_ncbi",
60 "tool_shed": "toolshed.g2.bx.psu.edu"
61 },
62 "name": "Retrieve FASTA from NCBI"
63 }
64 },
65 "annotation": "",
66 "name": "Metavisitor: Workflow for proteic vir2 generation"
67 }