Mercurial > repos > artbio > metavisitor_2_workflows
view Galaxy-Workflow-Metavisitor__Workflow_for_proteic_vir2_generation.ga @ 1:6396f06de8a9 draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/workflows/metavisitor_2_workflows commit 46881c948d0ad16e8c687657648402eeb5a886fb
author | artbio |
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date | Wed, 21 Aug 2019 06:30:46 -0400 |
parents | c375489bbcb0 |
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{ "a_galaxy_workflow": "true", "uuid": "224bad2a-247c-492d-b0ab-7d4ca6241d90", "tags": [], "format-version": "0.1", "version": 0, "steps": { "0": { "tool_id": "toolshed.g2.bx.psu.edu/repos/artbio/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/2.3.0", "errors": null, "uuid": "9c3e474c-3e57-4378-a5cc-ef9c6b7b092a", "tool_version": "2.3.0", "outputs": [ { "type": "fasta", "name": "outfile" }, { "type": "txt", "name": "logfile" } ], "post_job_actions": { "RenameDatasetActionoutfile": { "output_name": "outfile", "action_type": "RenameDatasetAction", "action_arguments": { "newname": "Vir2" } } }, "workflow_outputs": [ { "output_name": "outfile", "uuid": "c65e9a65-8c83-4caa-930a-347711a3e030", "label": null }, { "output_name": "logfile", "uuid": "990bc867-6319-4e49-825c-72093dbd7b14", "label": null } ], "annotation": "", "content_id": "toolshed.g2.bx.psu.edu/repos/artbio/fetch_fasta_from_ncbi/retrieve_fasta_from_NCBI/2.3.0", "input_connections": {}, "inputs": [], "position": { "top": 275, "left": 261 }, "tool_state": "{\"__page__\": null, \"__rerun_remap_job_id__\": null, \"queryString\": \"\\\"txid10239[Organism] NOT txid131567[Organism] NOT phage[All Fields] NOT patent[All Fields] NOT chimeric[Title] NOT vector[Title] NOT method[Title] NOT X174[All Fields] AND 30:9000[Sequence length]\\\"\", \"dbname\": \"\\\"protein\\\"\", \"dry_run\": \"\\\"false\\\"\"}", "label": "Vir2", "type": "tool", "id": 0, "tool_shed_repository": { "owner": "artbio", "changeset_revision": "c667d0ee39f5", "name": "fetch_fasta_from_ncbi", "tool_shed": "toolshed.g2.bx.psu.edu" }, "name": "Retrieve FASTA from NCBI" } }, "annotation": "", "name": "Metavisitor: Workflow for proteic vir2 generation" }