Mercurial > repos > artbio > mircounts
comparison test-data/translated_dme.gff3 @ 5:9ea96a02c416 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mircounts commit 04980585c257ab5f8eb5d10de007316c47c5d1ce
author | artbio |
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date | Tue, 05 Sep 2017 06:33:16 -0400 |
parents | 6b8adacd4750 |
children | 2a08a6eb471c |
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4:da1aa7de2b19 | 5:9ea96a02c416 |
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1 ##gff-version 3 | 1 ##gff-version 3 |
2 ##generated by mature_mir_gff_translation.py | 2 ##date 2014-6-22 |
3 # | 3 # |
4 # Chromosomal coordinates of microRNAs ** relative to the hairpin precursors ** | 4 # Chromosomal coordinates of Drosophila melanogaster microRNAs |
5 # microRNAs: miRBase current_version | 5 # microRNAs: miRBase v21 |
6 # genome-build-id: check http://mirbase.org/ | 6 # genome-build-id: BDGP5.0 |
7 # | 7 # |
8 # Hairpin precursor sequences have type "miRNA_primary_transcript". | 8 # Hairpin precursor sequences have type "miRNA_primary_transcript". |
9 # Note, these sequences do not represent the full primary transcript, | 9 # Note, these sequences do not represent the full primary transcript, |
10 # rather a predicted stem-loop portion that includes the precursor | 10 # rather a predicted stem-loop portion that includes the precursor |
11 # miRNA. Mature sequences have type "miRNA". | 11 # miRNA. Mature sequences have type "miRNA". |
12 # | |
13 # generated by mature_mir_gff_translation.py 2017-09-05 11:53:29.042787 | |
12 # | 14 # |
13 dme-bantam . miRNA_primary_transcript 1 81 . + . ID=MI0000387;Alias=MI0000387;Name=dme-bantam | 15 dme-bantam . miRNA_primary_transcript 1 81 . + . ID=MI0000387;Alias=MI0000387;Name=dme-bantam |
14 dme-bantam-5p . miRNA 15 37 . + . ID=MIMAT0020823;Alias=MIMAT0020823;Name=dme-bantam-5p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam | 16 dme-bantam-5p . miRNA 15 37 . + . ID=MIMAT0020823;Alias=MIMAT0020823;Name=dme-bantam-5p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam |
15 dme-bantam-3p . miRNA 52 74 . + . ID=MIMAT0000365;Alias=MIMAT0000365;Name=dme-bantam-3p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam | 17 dme-bantam-3p . miRNA 52 74 . + . ID=MIMAT0000365;Alias=MIMAT0000365;Name=dme-bantam-3p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam |
16 dme-let-7 . miRNA_primary_transcript 1 78 . + . ID=MI0000416;Alias=MI0000416;Name=dme-let-7 | 18 dme-let-7 . miRNA_primary_transcript 1 78 . + . ID=MI0000416;Alias=MI0000416;Name=dme-let-7 |