Mercurial > repos > artbio > mircounts

comparison test-data/translated_dme.gff3 @ 5:9ea96a02c416 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mircounts commit 04980585c257ab5f8eb5d10de007316c47c5d1ce
author artbio
date Tue, 05 Sep 2017 06:33:16 -0400
parents 6b8adacd4750
children 2a08a6eb471c
comparison
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4:da1aa7de2b19 5:9ea96a02c416
1 ##gff-version 3 1 ##gff-version 3
2 ##generated by mature_mir_gff_translation.py 2 ##date 2014-6-22
3 # 3 #
4 # Chromosomal coordinates of microRNAs ** relative to the hairpin precursors ** 4 # Chromosomal coordinates of Drosophila melanogaster microRNAs
5 # microRNAs: miRBase current_version 5 # microRNAs: miRBase v21
6 # genome-build-id: check http://mirbase.org/ 6 # genome-build-id: BDGP5.0
7 # 7 #
8 # Hairpin precursor sequences have type "miRNA_primary_transcript". 8 # Hairpin precursor sequences have type "miRNA_primary_transcript".
9 # Note, these sequences do not represent the full primary transcript, 9 # Note, these sequences do not represent the full primary transcript,
10 # rather a predicted stem-loop portion that includes the precursor 10 # rather a predicted stem-loop portion that includes the precursor
11 # miRNA. Mature sequences have type "miRNA". 11 # miRNA. Mature sequences have type "miRNA".
12 #
13 # generated by mature_mir_gff_translation.py 2017-09-05 11:53:29.042787
12 # 14 #
13 dme-bantam . miRNA_primary_transcript 1 81 . + . ID=MI0000387;Alias=MI0000387;Name=dme-bantam 15 dme-bantam . miRNA_primary_transcript 1 81 . + . ID=MI0000387;Alias=MI0000387;Name=dme-bantam
14 dme-bantam-5p . miRNA 15 37 . + . ID=MIMAT0020823;Alias=MIMAT0020823;Name=dme-bantam-5p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam 16 dme-bantam-5p . miRNA 15 37 . + . ID=MIMAT0020823;Alias=MIMAT0020823;Name=dme-bantam-5p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam
15 dme-bantam-3p . miRNA 52 74 . + . ID=MIMAT0000365;Alias=MIMAT0000365;Name=dme-bantam-3p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam 17 dme-bantam-3p . miRNA 52 74 . + . ID=MIMAT0000365;Alias=MIMAT0000365;Name=dme-bantam-3p;Derives_from=MI0000387;Parent_mir_Name=dme-bantam
16 dme-let-7 . miRNA_primary_transcript 1 78 . + . ID=MI0000416;Alias=MI0000416;Name=dme-let-7 18 dme-let-7 . miRNA_primary_transcript 1 78 . + . ID=MI0000416;Alias=MI0000416;Name=dme-let-7