Mercurial > repos > artbio > mutational_patterns

annotate COSMIC_v2_SBS_GRCh37.txt @ 21:8a5aaa97dbd6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit 91415d0273efacfc605199a8fbebaf421da9df7e"
author artbio
date Wed, 20 Oct 2021 17:38:25 +0000
parents 8c6ee1c2248f
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
17
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
1 Type SBS1 SBS2 SBS3 SBS4 SBS5 SBS6 SBS7 SBS8 SBS9 SBS10 SBS11 SBS12 SBS13 SBS14 SBS15 SBS16 SBS17 SBS18 SBS19 SBS20 SBS21 SBS22 SBS23 SBS24 SBS25 SBS26 SBS27 SBS28 SBS29 SBS30
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
2 A[C>A]A 0.011098326166 0.000682708227003414 0.0221723067751109 0.0365 0.014941547714 0.0017 4e-04 0.0367180037768898 0.012 7e-04 2e-04 0.0077 0.000334757187 1e-04 0.0013 0.0161 0.001832019172 0.0505364186250505 0.0107 0.001179961596 1e-04 0.0015040703750015 0.000453360682999093 0.0286459925360286 0.0098967680010099 0.00203977290999388 0.00520562690902082 0.00139743884199441 0.06998198728 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
3 A[C>A]C 0.009149340734 0.000619107232003095 0.0178716753530894 0.0309 0.008960917997 0.0028 5e-04 0.0332457222459003 0.0067 0.001 0.001 0.0047 0.000648736139 0.0042 0.004 0.0097 0.000342235622 0.0109398247890109 0.0074 0.002211505148 7e-04 0.00245101101500245 0.000366800483999266 0.0202146384330202 0.006998928770007 0.00148716228399554 0.00473822741501895 0.000917187664996331 0.055152357207 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
4 A[C>A]G 0.001490070468 9.92789560004964e-05 0.00213833961701069 0.0183 0.002207846012 5e-04 0 0.00252531125599242 5e-04 3e-04 0 0.0017 3.8144594e-05 5e-04 0 0.0022 1.576225e-06 0.00228807269700229 5e-04 1.61691e-07 0 0 0 0.0204789964850205 0.00144844299800145 0.000283945613999148 0.000782697937003131 0 0.017846984044 0.0019673
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
5 A[C>A]T 0.006233885236 0.000323891363001619 0.0162651455900813 0.0243 0.009206905292 0.0019 4e-04 0.0335985495158992 0.0068 0.0092 2e-04 0.0046 0.00084665846 0.0296 0.0057 0.0088 0.003179664772 0.0194240913640194 0.0074 0.003008009987 6e-04 0.000922452518000922 0 0.0246001454250246 0.00496656500400497 0.000597865637998206 0.00271824245501087 0.000513409970997946 0.026804715973 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
6 A[C>G]A 0.001801068369 0.000263481044001317 0.02400261520212 0.0097 0.011671021651 0.0013 0 0.00835684480597493 0.0048 5e-04 7e-04 0.0031 0.003775165298 1e-04 0.0011 0.0048 0.001661704195 0.00151688758000152 0.0058 0.00069704107 5e-04 0.000527644040000528 0 0.011993038821012 0.00803256764600803 0.00127288129699618 0.0013241632460053 0.000255194995998979 0.009301971097 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
7 A[C>G]C 0.00258090852 0.000269866049001349 0.0121603036680608 0.0054 0.007292088583 0.0012 0 0.00430638030398708 0.0023 3e-04 3e-04 0.0015 0.000920824828 0 1e-04 0.0024 0.001626898399 0.0024987845270025 0.0019 0.002059310006 8e-04 0 0 0.00842511979200843 0.00163597041300164 0.00152819486199542 0.00177108412900708 0.000268898963998924 0.003479048871 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
8 A[C>G]G 0.000592548022 0.000219233911001096 0.00527541945802638 0.0031 0.002303839151 0 0 0.000584415302998247 0 0 0 0 1.9890489e-05 0 6e-04 0 2.5801897e-05 0.00261450898300261 0 1.2734958e-05 0 0 0 0 0 0.000307246307999078 0 0 0.000154433523 0.00482
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
9 A[C>G]T 0.002963986287 0.000610973492003055 0.0232776563421164 0.0054 0.011696245747 0.0018 1e-04 0.00863490691197409 0.0038 2e-04 9e-04 0.0025 0.003860632488 1e-04 0.001 0.0073 0.001328507581 0.00398301117000398 0.0072 0.000848587116 0.0018 0.000299454735000299 0 0.00388138318500388 0.00342844970100343 0.00249825182599251 0.00132271981900529 0.000307698015998769 0.003976789927 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
10 A[C>T]A 0.029514532745 0.00744155681703721 0.0178721707320894 0.012 0.021839187574 0.0312 0 0.0180666871559458 0.0093 0 0.0225 0.0121 0.001480180764 0.0293 0.0117 0.0135 0.009350488403 0.00382562391200383 0.0221 0.032858047272 0.0051 0.00311338969500311 0.0197671543719605 0.00631551813600632 0.020987618053021 0.00590723203898228 0.0137232857870549 0.00543379247097827 0.005197221326 0.065119
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
11 A[C>T]C 0.014322747041 0.00272631242801363 0.00889603432304448 0.0075 0.012756105638 0.0163 0.0197 0.00565001502898305 0.0056 0.0032 0.1099 0.0054 4.0508707e-05 0.0321 0.0169 0.0076 0.004224289013 0.00246521426100247 0.0203 0.022196046913 0.0062 0.00152486029000152 0.0818805799248362 0.00384432691700384 0.0131412836970131 0.0106264578159681 0.0054243060010217 0.00181541548799274 0.00897646999 0.054397
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
12 A[C>T]G 0.171646931305 0.00332208328101661 0.00357270835001786 0.0028 0.016760177116 0.0908 1e-04 0.0192651054649422 0.0125 0.0126 0.0072 0.0019 0.000316594671 0.0496 0.0309 0.0035 0.009229213313 0.00846395688600846 0.0368 0.034572014703 0.0256 0.00362564120100363 0.0092487150849815 0.00311066442500311 0.0196598942850197 0.0199303232389402 0.00670642945402683 0.00543203933097827 0.03163899636 0.0204604
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
13 A[C>T]T 0.012623763151 0.00332652841701663 0.014797612209074 0.0059 0.016477954692 0.0149 0.0043 0.0208059674969376 0.0076 0.0047 0.0639 0.0067 0 0.0277 0.0066 0.0101 0.005735961173 0.00560573992700561 0.0266 0.018819559611 0.003 0 0.0332096522089336 0.00342041867300342 0.00572851931200573 0.011334530551966 0.0044756140340179 0.00162921318899348 0.004769666594 0.0219359
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
14 A[T>A]A 0.004021520333 1.32377000000662e-07 0.00842856356604214 0.0048 0.008902904323 6e-04 0.001 0.0133650828109599 0.0121 0 2e-04 0.0058 0.001243618346 0 0.0021 0.0081 0.00061300245 0.00303721080400304 0.0011 0.000574401358 0.0083 0.0496192297120496 0 0.00116674712600117 0.0204305271250204 0.00445933987898662 0.143076389009572 0.000964030890996144 0 0.0075743
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
15 A[T>A]C 0.002371144163 0.000113069562000565 0.00737309667003687 0.0039 0.007399202496 0.0033 8e-04 0.0124312020769627 0.0042 2e-04 1e-04 0.0065 0.001060001878 8e-04 0.009 0.0073 0.001878587472 0.000811167214000811 0.0053 0.001971462059 0.0292 0.0116667404640117 0 1.51730570000152e-05 0.00889256066100889 0.0128222429159615 0.00146408538700586 0.00336566780898654 0.003049595749 0.003738
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
16 A[T>A]G 0.002810909959 0.000532929416002665 0.00735730002003679 0.01 0.011508051457 0 9e-04 0.0140366570669579 0.0068 0 7e-04 0.0046 0.00010255436 0 9e-04 0.008 0.001087349685 0.0045032071380045 0.0045 0.000190586616 0.0027 0.0679154542130679 0.000237418520999525 0.00633245557300633 0.00624194848000624 0.00117234427199648 0.00122628089700491 0.00178575364999286 0.003909981984 0.0065906
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
17 A[T>A]T 0.008360909345 0.000149110959000746 0.00875393899104377 0.003 0.011193623195 0.0053 0.0035 0.0241099165959277 0.0185 0.0012 3e-04 0.006 0.000971812099 9e-04 0.0079 0.0084 0.002045493651 0.00273652318500274 0.0033 0.007421103528 0.0043 0.0145999175800146 0 4.96721600000497e-06 0.0148508776220149 0.00399313754898802 0.00253519795101014 0.00565308909997739 0.005105527437 0.0093447
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
18 A[T>C]A 0.01391577303 0.00130350955800652 0.0130357094320652 0.0084 0.035366735114 0.0075 5e-04 0.0162065101009514 0.0252 0.0031 6e-04 0.0466 0.000549454166 0.0026 0.0115 0.0717 0.002697314025 0.00293305364400293 0.0145 0.016395062964 0.0265 0.0168399309490168 0.00106844881999786 0.00472600914200473 0.0206632827730207 0.0550286521328349 0.00504730108102019 0.00409274688798363 0.010119181163 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
19 A[T>C]C 0.0062749606 0.000425576677002128 0.00918628969004593 0.002 0.013771102129 0.0056 1e-04 0.00778780281997664 0.0105 0.0052 0.0015 0.0317 0.000145506661 0.0046 0.0073 0.0171 0.008078150072 0.00151328476300151 0.0048 0.019251793639 0.0165 0.00110826238200111 0.000221573158999557 0.000627949341000628 0.0095024784240095 0.0275946042079172 0.00184569122800738 0.00788072921096848 0.006349682655 0.0087547
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
20 A[T>C]G 0.010137636154 0.000575473007002877 0.0117169200770586 0.0081 0.028449051657 0.0217 7e-04 0.00985258355297044 0.0176 0.0026 8e-04 0.0487 0.000279178024 0.0035 0.0073 0.0348 0.004432870698 0.00332966895500333 0.0135 0.054784918009 0.0224 0.00491361640500491 0.000498801513999002 0.00272375862700272 0.0199114924560199 0.0517910440498446 0.00568881387902276 0.00552083360397792 0.014659610308 0.0090498
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
21 A[T>C]T 0.009256316389 0.00148816409300744 0.0169788707980849 0.0036 0.027302974158 0.0023 0.0011 0.0218294638259345 0.0247 0.004 3e-04 0.025 0.000267461432 0.0025 0.0063 0.0497 0.003140370209 0.00549131777100549 0.016 0.007341269916 0.0189 0.00263052393300263 0.000313240540999374 0.00712236847000712 0.0144883902550145 0.0390722444188828 0.00259275457701037 0.00323248399998707 0.007892413403 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
22 A[T>G]A 0.001587636423 3.37184110001686e-05 0.00235136807601176 0 0.003462151975 0 0 0.00421971928398734 0.0335 0 0 0.0012 0.00038619979 0 0 0.0052 5.3139249e-05 0.000386138197000386 0.0014 1.765291e-06 0 0.00165199861500165 0 0 0.00528167968200528 8.0653425999758e-05 0.00113633739200455 0.00636467555497454 0 0.0053118
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
23 A[T>G]C 0.001784091288 2.48448260001242e-05 0.00146423112900732 2e-04 0.002246592659 0.0017 0 0.000793671328997619 0.0051 0.004 0 0.001 0.000112383214 0.002 6e-04 0.0042 0.006468661271 0.00125498208000125 0 0.000381387913 0.0031 0 0 0.00146395068800146 0 0.00016317120999951 0.000958976380003836 0.0166109056469336 0 0.0024592
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
24 A[T>G]G 0.001385830552 0.000273454078001367 0.00905377764204527 0.0015 0.005490216837 7e-04 9e-04 0.0068658003739794 0.0052 0.0015 1e-04 0.0018 3.6000696e-05 7e-04 0.0012 0.0061 0.003481549012 0.00236921607300237 0.001 0.000658758087 0.0016 0.00108687275800109 0 0.000847612530000848 0.00713642164400714 0.00125507950699623 6.76606100002706e-05 0.00659284224497363 0.002925171448 0.0062955
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
25 A[T>G]T 0.003158539312 0.000217694872001088 0.00703097641903516 2e-04 0.003821226712 0.0029 0 0.00293992225899118 0.0193 0.0137 0 0.003 0.000192493754 0.0056 0.0029 0.0076 0.030926375169 0.000338602881000339 0.0017 0.000532125222 0.0018 0 0 0.00107545529400108 0 0.00185038349199445 0.000256027748001024 0.0863928974346544 0 0.0095416
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
26 C[C>A]A 0.006595870109 0.000677444988003387 0.0187817255730939 0.0461 0.00967490433 0.0101 0.0012 0.0317237565899048 0.0098 0.0031 7e-04 0.0135 0.001710089561 0.0056 0.0106 0.0159 0.001032430218 0.0887681088190888 0.0112 0.017377110647 0.002 0.00454969294400455 0.000164739381999671 0.0635592837930636 0.0148329478750148 0.00370585008298888 0.00506507326802026 0.00116851563699533 0.051410211701 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
27 C[C>A]C 0.007342367815 0.000213681013001068 0.0157604578420788 0.0614 0.004952300642 0.0241 6e-04 0.0255054071349235 0.0057 9e-04 0.0017 0.0112 0.001159256581 0.0102 0.0084 0.01 0.000421880127 0.0206413905570206 0.0159 0.036502462984 0.0014 0.00376447385400376 0.000736874801998526 0.0337570047160338 0.00782217530200782 0.00398072337298806 0.00223415334400894 0.000334291810998663 0.025825650831 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
28 C[C>A]G 0.00089284037 6.77046000003385e-06 0.00196338984600982 0.0088 0.002800627307 0.0091 0 0.00115962430299652 0 7e-04 0.001 0.0028 0.000244166533 9e-04 0.0015 0.0022 0.000297462769 0.0171784024800172 0.0018 0.012482587542 0.0027 0.0009001633310009 0.000163953660999672 0.0224289858060224 0.00127697673200128 0.000811741969997565 0.000266312161001065 5.36519979997854e-05 0.014496183324 0.0022624
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
29 C[C>A]T 0.007186581642 0.000416332906002082 0.0147228611260736 0.0432 0.011013465824 0.0571 0.0013 0.0287911729709136 0.0091 0.016 0.0014 0.0071 0.001256768244 0.1257 0.0228 0.0084 3.1479429e-05 0.0376769589290377 0.0096 0.103401226249 0.0056 0.00443984623100444 0.000722731834998555 0.0200865154380201 0.0125636547190126 0.0190384313449429 0.0031005700090124 0.000186671901999253 0.040355074099 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
30 C[C>G]A 0.001284983446 2.77720770001389e-05 0.0168325719890842 0.0105 0.007537523174 0 1e-04 0.00661907721598014 0.0018 0 0 0.0019 0.005333651375 0 9e-04 0.004 0.001924978751 0.000458463822000458 2e-04 1.331626e-05 1e-04 0.000582017663000582 0.000199049173999602 0.0134768216090135 0.0072007904100072 0.00127910606899616 0.00473064942601892 0.000103366091999587 0.002618863169 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
31 C[C>G]C 0.000702134818 0.000279643862001398 0.0135314415270677 0.0097 0.007633226665 0 4e-04 0.00607770289498177 0.002 0 2e-04 0.0019 0.000912303471 0 3e-04 0.005 0.000709367774 0.00365422833000365 0.0028 0.000548144708 0 0.000825299647000825 0.000283776025999432 0.0161056877370161 0.0045984731170046 0.00121497730299635 0.00126164484200505 0.000144310791999423 0.00111151227 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
32 C[C>G]G 0.000506289594 1.91615760000958e-05 0.00417645752402088 0.0063 0.002613760399 0 6e-04 0.000656033432998032 0 0 8e-04 0 0.000285467331 0 4e-04 0.0028 3.517869e-06 0.00540577424500541 2e-04 0 0 0.000382114636000382 0 0.000797471998000797 0.000823709283000824 0.000207832587999377 0.000360856587001443 0 0.00152004695 0.0032461
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
33 C[C>G]T 0.001381542722 0.000312781573001564 0.0240463904241202 0.0094 0.009417097876 2e-04 3e-04 0.00780502695697658 0.0039 0 2e-04 0.0019 0.006383097568 0 0.0017 0.008 0.000953776334 0.00551960482000552 8e-04 0.000120730556 3e-04 0.00176064591100176 0.000195775337999608 0.0103886658820104 0.000196360325000196 0.00229702621099311 0.000268026230001072 0.000290999508998836 0.000139750691 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
34 C[C>T]A 0.020896446965 0.0150195069310751 0.014395059491072 0.021 0.022769209355 0.0085 0.0754 0.0048658100209854 0.0098 0.0012 0.031 0.0187 0.003647278451 0.006 0.0051 0.021 0.021265205902 0.00976751147500977 0.0438 0.011145185306 0.0034 0.00773134952200773 0.0605726278048789 0.00603544739400604 0.0143339946910143 0.00659444488498022 0.0174384847780698 0.00439153255398243 0.009126471767 0.0694472
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
35 C[C>T]C 0.01850170477 0.00351691809801758 0.00854478119204273 0.0144 0.017509476305 0.0099 0.1007 0.00398015043098806 0.0069 0.0024 0.1518 0.0094 0.001004229295 0.0167 0.0088 0.0098 0.003847235312 0.00565482846200565 0.0753 0.018152746866 0.0091 0.00711085052600711 0.186375634075627 0 0.00593664365900594 0.00651063197098047 0.00714487020702858 0.00264766096598941 0.007067603037 0.0638403
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
36 C[C>T]G 0.095577217268 0.0049792757150249 0.00351846584001759 0.0076 0.012862237589 0.0901 0.0208 0.00833863918197498 0.0076 0.0109 0.0135 0.0046 0.000129202148 0.0293 0.0155 0.0016 0.013176112314 0.0161832229640162 0.0238 0.044384942487 0.0318 0.0055020309650055 0.0151490825929697 0.00292441907400292 0.0115593916270116 0.0119049353239643 0.00750356165503001 0.00228456355099086 0.019875180409 0.0173126
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
37 C[C>T]T 0.017113307642 0.00895655277504478 0.0160755457120804 0.0201 0.020429513385 0.0087 0.0788 0.0188436274339435 0.0097 0.0043 0.0816 0.0205 0.00061176997 0.0186 0.0096 0.0211 0.009648025316 0.00515331861300515 0.1159 0.013847136214 0.004 0.00416977724100417 0.156015396976688 0.00397120157500397 0.0136325968850136 0.00623855632698128 0.00714802770202859 0.0024239842669903 0.001634058687 0.0342318
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
38 C[T>A]A 0.001182587416 0.000154598981000773 0.00757132026003786 0.0075 0.005043163511 1e-04 0 0.0120242175219639 0.0055 0 4e-04 0.0017 0.000285158991 0 0.0016 0.0054 3.0079241e-05 0.000412346353000412 0.0043 4.5042364e-05 0 0.0868985455160869 0.000594528452998811 0.00276663483800277 0.0262963230890263 0.00356142268098932 0.330601017472322 0.00256657996698973 0.001765447503 0.0053118
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
39 C[T>A]C 0.001903166857 0.00046401902800232 0.0127254635280636 0.0111 0.006208843676 0.0026 0.0014 0.0178810924229464 0.0049 1e-04 0.0011 0.0086 0.000222287328 0.0034 0.0043 0.0128 0.010223747696 0.00249141131000249 0.0053 0.004389055645 0.0037 0.0537068468090537 0 0.00269446245400269 0.0157998830850158 0.00390161098098829 0.00281359880801125 0.0196108974289216 0.000383359117 0.0067873
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
40 C[T>A]G 0.00148796063 0.000230409809001152 0.0115085618650575 0.0342 0.01050756897 8e-04 7e-04 0.0163567745329509 0.0051 3e-04 6e-04 0.0031 0.000286951828 2e-04 0.0027 0.013 0.004467036232 0.00552304571300552 0.0021 0.001127835842 0.0025 0.213220866558213 0.000173120399999654 0.00691116472100691 0.0628606063810628 0.00239030417999283 0.00439685708301759 0.00883360003196467 0.003556845215 0.0082628
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
41 C[T>A]T 0.002179344412 0.000574885587002874 0.0164561776960823 0.0115 0.009784640746 0.0011 0.0018 0.0262478019169213 0.0069 9e-04 4e-04 0.0054 8.00446e-07 0.002 7e-04 0.0096 0.031244883388 0.00331371327300331 0.0022 0.002385541321 0.001 0.0618275074760618 0.000457813098999084 0.00291520016500292 0.0366223511120366 0.00163592266699509 0.00543089163302172 0.0109426098199562 0.002232755492 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
42 C[T>C]A 0.004176674882 0.000546619204002733 0.00789501261103948 0.0052 0.014238629786 0.0062 0.001 0.00517384241698448 0.0154 5e-04 1e-04 0.0312 4.2751466e-05 6e-04 0.0032 0.0146 0.007426999646 0.000192169320000192 0.0066 0.014867696528 0.0219 0.00402734633400403 0 0.00184887653500185 0.00902801489400903 0.0378893776908863 0.0048990792380196 0.020738003351917 0 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
43 C[T>C]C 0.005252593331 0.000392332573001962 0.0144311703620722 0.0026 0.01248950044 0.004 8e-04 0.0109368937679672 0.0118 0.0019 4e-04 0.0385 4.3307542e-05 0.0053 0.005 0.0194 0.039657001207 0.00305019258100305 0.007 0.018356161025 0.01 0.00135244392900135 0 0.00445368985700445 0.0107716324200108 0.0217407349529348 0.0057244484670229 0.0432837972458269 0.002774953681 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
44 C[T>C]G 0.00701322531 0.00036202450800181 0.00842297214404212 0.01 0.018741631229 0.027 0.001 0.00565777360198303 0.0154 0.0015 1e-04 0.0415 5.4272534e-05 0.0016 0.0128 0.019 0.028609696263 0.0025964641930026 0.004 0.074150562563 0.0211 0.00274966613700275 0.000320704885999359 0 0.0133506613100133 0.0472401033428583 0.00566147899202265 0.0370882617278517 0.006902414709 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
45 C[T>C]T 0.006713813119 0.000560900126002804 0.0119324304650597 0.0054 0.019054082944 0.0033 0.0045 0.0111203893219666 0.0275 0.002 9e-04 0.0324 7.63944e-07 0.0027 0.0035 0.0263 0.101869657701 0.00131002874400131 0.0053 0.011001118253 0.0204 0.00236335353700236 0 0.0015973890070016 0.00896102996600896 0.0207406214309378 0.0039005890620156 0.00505271601797979 0.003041424895 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
46 C[T>G]A 0.000302691186 0.000113784603000569 0.00197418114600987 0 0.002041648941 1e-04 0 0.00242405055199273 0.0216 0.0022 0 0.0013 1.5094208e-05 0 0 2e-04 9.1469787e-05 6.1002548000061e-05 0 2.3264084e-05 0 0.00112035651500112 0 0 0 9.53962599997138e-05 0 0.00958984194096164 0.001116854814 0.0046233
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
47 C[T>G]C 0.00209850244 2.20950870001105e-05 0.00582429554502912 0.0013 0.003478502118 0.004 8e-04 0.00209621061599371 0.0064 0.0018 1e-04 0.0049 0.00014762484 0.002 0.0019 0.0082 0.019814293551 0.00201569691300202 0.0011 0.008476494525 5e-04 0.00106458357100106 0.00019014434199962 0.00218543734800219 0.00288645433700289 0.00391945509998824 0.000381244984001525 0.0339132237218644 0 0.0060004
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
48 C[T>G]G 0.0015995485 0.000228245948001141 0.0104646545250523 0.0046 0.007147456226 0.005 9e-04 0.00660404629398019 0.0126 0.0037 0.0011 0.0045 4.59873e-05 5e-04 7e-04 0.0067 0.013449837633 0.00531196725400531 0.0013 0.015383776115 4e-04 0.00418856812600419 0 0.000113909674000114 0.0117694924990118 0.00549735731398351 0.000403257236001613 0.0185164816059259 0.002169693346 0.0073775
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
49 C[T>G]T 0.002758537619 6.71113400003356e-05 0.00872438730204362 0.0012 0.011486811509 0.0086 0.0013 0.0048667138589854 0.0509 0.0182 9e-04 0.0063 0.000463714722 0.0063 0.0045 0.0186 0.261456614079 0.00234162917800234 0.0019 0.002185394659 0.0032 0.00162940957300163 0.000210834979999578 0.00253371833300253 0.00855080748200855 0.00678871869097963 0.00143909606900576 0.118967102953524 0.001143663251 0.0091481
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
50 G[C>A]A 0.008232603989 0.00035201335300176 0.00969653967604848 0.0376 0.011892168979 0.0024 3e-04 0.023682328868929 0.0118 0.0014 4e-04 0.0062 0.000132109643 0.0018 0.0024 0.0096 0.006535404875 0.128724158080129 0.0032 0.001116123789 1e-04 0.0012983701610013 0.0003499074949993 0.0546764486790547 0.0134652950530135 0.00137531184599587 0.010755871858043 0.00213662907699145 0.078046610108 0.008853
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
51 G[C>A]C 0.00575802141 0.000133816879000669 0.0108433411160542 0.0399 0.009247857495 0.0058 1e-04 0.0158218964449525 0.0092 0.0022 0.001 0.0056 0.000754244011 0.0114 0.0099 0.0094 0.001293803953 0.0160928786630161 0.0031 0.003271428605 0.0038 0.00180962215200181 0.000568337771998863 0.10994598899711 0.00646829805800647 0.00196163908799411 0.0124423351170498 0.000429208378998283 0.073460914669 0.0093449
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
52 G[C>A]G 0.000616335232 0.000178441660000892 0.000929140538004646 0.0227 0.002809188466 0.0021 0 0.000850913753997447 0 2e-04 0 0.0015 9.6820775e-05 0.0011 0.0013 0.0036 0.001283663378 0.00927141676200927 0 0.003751612508 3e-04 0.000333838055000334 0.000149417833999701 0.0465248690100465 0.000658103089000658 1.32296639999603e-05 0.00162962834700652 0 0.017383296915 0.0008853
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
53 G[C>A]T 0.004459080311 0.000122832046000614 0.0122153826390611 0.0258 0.010301267456 0.0087 1e-04 0.0210612358019368 0.0085 0.0088 6e-04 0.0027 0.000551103672 0.0736 0.0309 0.0063 0.003103766672 0.072017070126072 0.0072 0.01293719445 0.0023 0.000519148161000519 0 0.0504287094820504 0.0104730803470105 0.00193499629299419 0.00741235515202965 0.00131850725599473 0.059602472118 0.0081645
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
54 G[C>G]A 0.000602122711 4.48385140002242e-05 0.0119168445690596 0.007 0.005559423089 0 0 0.00372456794598883 0.0011 0 0 0.0012 0.001349419584 2e-04 0.0022 0.0031 0.001296324191 0.000923879703000924 0.002 0.001339769321 4e-04 0 0 0.00494506070800494 0.00416965552400417 0.00132060747499604 0.00141816638700567 8.15914109996736e-05 0.000265759858 0.0073775
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
55 G[C>G]C 0.002393352209 1.45201030000726e-05 0.00982365339704912 0.0091 0.005388801221 0.003 4e-04 0.00304659695299086 0.0029 2e-04 2e-04 0.0011 0.000788807743 1e-04 5e-04 0.0032 0.000260760911 0.000648647922000649 0 0.001811151475 0.0042 0 0.000137501073999725 0.00936987577400937 0.00239280494400239 0.00184550107099446 0.00134671678200539 0.000105219030999579 0.000945012884 0.0065906
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
56 G[C>G]G 2.48534e-07 4.06658890002033e-05 0.00167105425000836 0.0062 0.001100589633 0 0 0.000321212792999036 0 0 0 0 8.1791214e-05 0 6e-04 0 4.377552e-06 0.000542839968000543 0 6.37538e-07 0 0.000214695851000215 0 0.00562572654000563 0.000418193916000418 0.000205060776999385 0 0 0 0.0015739
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
57 G[C>G]T 0.000890080731 0.000268429459001342 0.0179143343060896 0.006 0.006041247837 0.0017 0 0.00577566359798267 0.0044 4e-04 0 9e-04 0.002680123244 3e-04 0.0018 0.0029 0.001820392786 0.00137672488800138 0 0.001238264182 4e-04 0.000538438803000538 0 0.00305577006400306 0.00199401221700199 0.00122553285599632 0.00456068597401824 0.000159679353999361 0.004796744744 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
58 G[C>T]A 0.024943814154 0.00639080787603195 0.0161272733320806 0.0087 0.020038258645 0.0653 0 0.00226126268599322 0.0062 0 0.0261 0.0124 0.002934137577 0.0557 0.0476 0.0125 0.002068754725 0.0027030687270027 0.0374 0.056793947985 0.0163 0.00191537085400192 0.0532820589648934 0.0236790512950237 0.01003811201301 0.00960651502697118 0.0142153137430569 0.00338424086898646 0.011638793032 0.0485934
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
59 G[C>T]C 0.027161494035 0.00199581678400998 0.00820863243704104 0.008 0.018022312238 0.0773 0.021 0.00161664918699515 0.0069 0.0134 0.0975 0.0092 0.002515171146 0.0618 0.1345 0.0092 0.000325483399 0.0041993075360042 0.0614 0.05442985727 0.0392 0.00322913354700323 0.162918343742674 0.0159192018400159 0.00695387515500695 0.0195074267199415 0.0201436461820806 0.00168741402899325 0.003781751661 0.0494787
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
60 G[C>T]G 0.103570762296 0.000303020977001515 0.00121292286600606 0.0023 0.013193817648 0.1339 2e-04 0.0116067115999652 0.0088 0.027 0.009 0.0023 0.00320526455 0.0978 0.1829 9e-04 0.007511101358 0.0118973608250119 0.0278 0.004592688609 0.0019 0.0033005988790033 0.0130464947439739 0.0126480776060126 0.0104683630270105 0.0225027173829325 0.00936846849603747 0.00218930895999124 0.019684388045 0.0157387
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
61 G[C>T]T 0.017689854381 0.00326581818801633 0.0106116492080531 0.0082 0.019502915335 0.0524 0.0161 0.00628492899598115 0.0101 0.0152 0.0522 0.0115 0.001687730545 0.0555 0.08 0.0116 0.000925697167 0.00191338090500191 0.0917 0.049580863753 0.0166 0.00111405957000111 0.107590399753785 0.0181297783780181 0.00982382073500982 0.0173074721839481 0.00758962595003036 0.00104399363099582 0.005761336823 0.0188865
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
62 G[T>A]A 0.000689289439 0.000114994210000575 0.00443478255902217 0.0069 0.006740387717 0 0 0.00813917860797558 0.003 0 3e-04 0.0015 0.000137960405 0 0 0.003 8.545689e-06 0.00187543408100188 0.0026 0.000163129836 0 0.0537091456930537 0 0.00222512733600223 0.0362178008370362 0.00224288651299327 0.109851871980439 0.000551460782997794 0.002930098053 0.003738
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
63 G[T>A]C 0.000552409528 0.000293862060001469 0.00561543241102808 0.0052 0.00402159648 0.0028 0 0.00791008031797627 0.0029 1e-04 3e-04 0.0039 0.000252867405 0.0025 0.0038 0.004 0.002573466959 0.00151030975700151 0 0.003799179503 0.0142 0.00948939669400949 0.000183203811999634 0.00485314915700485 0.00584710964700585 0.00520728709498438 2.34556780000938e-05 0.00316398759698734 0 0.0033445
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
64 G[T>A]G 0.001200228847 8.87213440004436e-05 0.00807013647204035 0.0133 0.006814352288 6e-04 6e-04 0.00905726305597283 0.0028 0 4e-04 0.0019 0.000153517461 0 0.0026 0.0051 0.003538822593 0.00150536877600151 0.0016 0.0008283337 0.0031 0.0502939024280503 0 0.000195758628000196 0.0382411793150382 0.00135812177799593 0.00156593715900626 0.00215284701299139 0.000533632401 0.0050167
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
65 G[T>A]T 0.002107136837 0.000215755466001079 0.0086791217440434 0.0045 0.005101032909 0.0021 0.001 0.0178122386469466 0.0036 4e-04 1e-04 0.0031 0.000122745552 9e-04 0.0043 0.0033 0.003879009961 0.00361102520200361 0.0052 0.001900746587 0.0041 0.0106014572330106 0 0 0.0201679544190202 0.00251311294199246 0 0.00200773324399197 0 0.0063939
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
66 G[T>C]A 0.011247835116 4.67385200002337e-06 0.00685005557403425 0.0061 0.016294982792 0.0122 2e-04 0.00572077854898284 0.0091 0.0064 0.001 0.0573 0.001054081222 0.0078 0.0195 0.0161 1.1401335e-05 0.000529126468000529 0.0039 0.002469317074 0.1426 0.00421745411300422 0.000251168627999498 0.00126974984000127 0.0174898238790175 0.0980528247187058 0.00477738035401911 0.00365504812698538 0.007090803763 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
67 G[T>C]C 0.006999724257 0.00018606592700093 0.0062607490140313 0.0016 0.009574560593 0.0059 1e-04 0.00518105150198446 0.0097 0.0101 0.0016 0.0274 0.000529899747 0.0127 0.0499 0.0099 0.009657713318 0.00227913082900228 0.003 0.001565632906 0.0665 0 0.000538218488998924 0.00671033999600671 0.00404561244600404 0.0402263639628793 0.00196495433000786 0.00707117532697172 0.007111327534 0.0065906
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
68 G[T>C]G 0.004977592617 4.95044000002475e-07 0.00609876299303049 0.0042 0.014103929348 0.0115 3e-04 0.00504070747098488 0.0094 0.0054 0.0019 0.041 0.000630095718 0.0082 0.0154 0.0148 0.004654129131 0.00587105658100587 0.006 0.027341755021 0.0884 0.00147488453400147 0 0.000277684976000278 0.0134022462740134 0.0446207009828661 0.00122916774900492 0.00823223843996707 0.005643063554 0.0078694
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
69 G[T>C]T 0.010667406133 0.000578598104002893 0.00750934385903755 0.0024 0.015666874692 0.0042 0.0081 0.00848822025797453 0.0126 0.0124 0.0023 0.0405 0.000676187888 0.0086 0.0094 0.0142 0.008149234601 0.00477156573900477 0.0099 0.001498264796 0.1003 0.00156104273800156 0.000995769680998008 0.00423847766900424 0.0141596937360142 0.0555280682798334 0.00374722501301499 0.000407884509998368 0.011237674345 0.0084596
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
70 G[T>G]A 9.9045003e-05 9.55523920004778e-05 0.00414448801802072 0 0.001627664547 0 0 0.000974578664997076 0.0072 0 0 0 1.8489857e-05 0 0 0 3.9193821e-05 0.00134153246400134 0 3.579149e-06 0 0 0 0 0.00554622692400555 3.73932319998878e-05 0 0 0 0.0032461
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
71 G[T>G]C 0.000202365646 4.7002381000235e-05 0.00450198531302251 0 0.000327734937 0.0016 0 0.000524821554998426 6e-04 0.002 0 4e-04 9.3373513e-05 0.0019 0.0022 0.0032 0.009078461515 9.2043100000092e-07 0 0.002830575073 6e-04 0 0 0.00107363230200107 0 0.00246070499499262 5.07905650002032e-05 0 0 0.001869
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
72 G[T>G]G 0.001188353185 0.00010992570300055 0.016391452608082 0.0018 0.005948879802 0.001 0.0017 0.00608775346698174 0.005 9e-04 0.001 0.0011 1.0579194e-05 0.0012 0.0037 8e-04 0.004782775461 0.00969499998100969 0.0043 0.002733219405 4e-04 0.00187758918100188 0.000187132413999626 0.00292469699600292 0.00868524444400869 0.000817201562997548 0.00474291855001897 0.00421780829898313 0.003640593813 0.0033445
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
73 G[T>G]T 0.000800723342 8.64771800004324e-05 0.00706723664303534 2e-04 0.003307466591 0.0035 9e-04 0.00542743378498372 0.0185 0.003 0 0.0032 5.3741207e-05 0.0038 0.019 0.0044 0.063497756582 0.00289055351900289 0.0025 0.003558558565 8e-04 0 0 0.000825098263000825 0.00276857168300277 0.0078335612709765 0.00229847603000919 0.0316489973208734 0.006181023776 0.0056069
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
74 T[C>A]A 0.012250063666 0.0151274275190756 0.0116532249090583 0.033 0.014774016248 0.0017 0.001 0.0270323830389189 0.0222 0.0374 9e-04 0.0066 0.048166047937 5e-04 0.0057 0.0122 0.001824558257 0.0670806435290671 0.0051 0.000688299692 1e-04 0.00405163455200405 0.00207128998499586 0.0314512631820315 0.00693814658500694 0.00268006242399196 0.00707928452202832 0.000775902767996897 0.026894406511 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
75 T[C>A]C 0.011162229329 0.00653249245403266 0.016606775011083 0.0538 0.012043464964 0.0029 0.002 0.0180897732899457 0.0043 0.0103 0.0025 0.0099 0.017329557089 0.0166 0.0062 0.0145 0.001286518338 0.0418690096930419 0.0063 0.00405822906 5e-04 0.00273977093700274 0.000696410200998607 0.0625382936990625 0.0102466074000102 0.00203164386599391 0.00626880062802508 0.000829292466996683 0.031608136996 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
76 T[C>A]G 0.002275495686 0.00165645539800828 0.00135723943900679 0.0104 0.003902362388 0.0011 2e-04 0.00169487519699492 0 0.0031 1e-04 0.0019 0.002293157306 0 0.0025 0.004 0.002172941968 0.0151623792900152 0.0018 0.001001102231 0 0.000513151070000513 9.93936329998012e-05 0.0128025907280128 0 0.000265071699999205 0.00144640341500579 0 0.012500468152 0.0016722
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
77 T[C>A]T 0.015259102491 0.012394610714062 0.0163280759750816 0.037 0.018243395705 0.0058 0.0013 0.0381413308678856 0.0322 0.3083 4e-04 0.0049 0.018634581512 0.0516 0.0145 0.0157 0.005012316394 0.117877846666118 0.0087 0.012229104507 4e-04 0.00360565089900361 0.000207430190999585 0.0302976796130303 0.0246257872260246 0.00301718745699095 0.00980627775003923 0.00199807366699201 0.04120717639 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
78 T[C>G]A 0.001874853199 0.0372418531491862 0.0160414054380802 0.0032 0.002681056961 0 2e-04 0.00411787883698765 0.0033 0 1e-04 0.0024 0.280234946548 0 9e-04 0.005 0.000392684657 0.0018029690510018 5e-04 2.4298469e-05 2e-04 0.000225490615000225 0.000230608943999539 0.0102208574360102 0.0097987245670098 0.00420189675098739 0.00287043372101148 0.000521370367997915 0.000820444889 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
79 T[C>G]C 0.002067418791 1.94134110000971e-05 0.0201499204281007 0.0105 0.007924048307 2e-04 0.001 0.0037996495919886 0.0025 0 0.0011 0.0027 0.063885286587 0 0.0026 0.0064 0.000655602418 0.00786300679400786 0.0011 0.00015199855 3e-04 0.000628695020000629 0.000165787008999668 0.00757836525200758 0.00326650715000327 0.00280776153399158 0.00310796756901243 0.000667325889997331 0.000444119287 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
80 T[C>G]G 0.000304897004 0.00162546545700813 0.00252791093601264 0.0031 0.001319075649 0 3e-04 2.5653017999923e-05 0 0 3e-04 0 0.009528486008 0 0 0 1.3641541e-05 0.00151322333400151 0 0 0 0.000395807994000396 0 0.00159271421700159 0.00205743675300206 6.19699999998141e-09 1.28104090000512e-05 0 0.000143297155 0.0019673
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
81 T[C>G]T 0.00315157446 0.0668798996843344 0.0326736407621634 0.005 0.006644595708 1e-04 7e-04 0.00624755373798126 0.0049 1e-04 8e-04 0.0015 0.330225481745 1e-04 0.0015 0.0169 0.002852380395 0.00356710206500357 0.0105 0.000683059976 3e-04 0.000257375147000257 0.000438955808999122 0.0061007271900061 0.0164009168500164 0.00801938298597594 0.00213058750300852 0.00124577953499502 0.001369869047 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
82 T[C>T]A 0.014492099634 0.4199413995961 0.0088802090610444 0.0035 0.010997560324 0.0074 0.1202 0.00718066853997846 0.005 0.0037 0.0302 0.0138 0.113842093163 0.0092 0.0112 0.0172 0.016100784572 0.0149233917010149 0.0218 0.01071032207 0.0064 0.00201672168800202 0.0145586136959709 0.0265718943460266 0.0110775208000111 0.0113032887679661 0.018757776459075 0.00762225767196951 0.012076583098 0.0849892
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
83 T[C>T]C 0.017680775357 0.0819724961444099 0.0135295727980676 0.007 0.020644964803 0.0067 0.2887 0.00406103293798782 0.0084 0.0211 0.1589 0.0095 0.015024839001 0.0283 0.0156 0.0131 0.016779984064 0.00996274431000996 0.033 0.00817550977 0.0086 0.00199083424600199 0.043510446938913 0.0120556910820121 0.00644878754000645 0.0108075269749676 0.00798918440603196 0.00511661924097953 0 0.090301
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
84 T[C>T]G 0.076002221712 0.0477201863682386 0.00170540885800853 0.0011 0.007534489574 0.0391 0.0992 0.00553512151998339 0.0047 0.2141 0.008 0.001 0.006102097956 0.0094 0.0104 0.0036 0.016272095596 0.0115497151260116 0.009 0.023163899202 0.0126 0.0014984730910015 0.0027526405439945 0.00536335968000536 0.0140834161810141 0.0103643293279689 0.00460913097101844 0.00191802810999233 0.015830196802 0.0151485
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
85 T[C>T]T 0.013761704021 0.228674918307143 0.0103044169280515 0.0077 0.011787461775 0.0047 0.0844 0.0122090704969634 0.0096 0.0392 0.0954 0.009 0.028140661233 0.0229 0.0076 0.0193 0.01982741755 0.0053980139940054 0.0267 0.009540087238 0.0064 0.00118222650200118 0.0243287852339513 0.00553249918000553 0.0124185858850124 0.00724914535997825 0.0118809324820475 0.00619315862597523 0.0134621373 0.045544
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
86 T[T>A]A 0.005600155423 8.07524860004038e-05 0.00713268135403566 0.0045 0.009205637343 2e-04 0.001 0.0151399962359546 0.0215 0 3e-04 0.0057 0.000403261316 0 8e-04 0.0085 0.000698812311 0.00466327804300466 0.0039 0.000924547968 0.0027 0.0408105028250408 0 0 0.0218303290490218 0.000628145255998116 0.0528138874942113 0.000203237562999187 0.001191207434 0.0076726
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
87 T[T>A]C 0.00199907926 4.80289800002401e-06 0.00910279782704551 0.0046 0.006835344247 8e-04 0.0015 0.0120935546059637 0.0027 8e-04 0 0.0132 0.000771813274 0.0016 0.0019 0.0087 0.002579358604 0.00257815554300258 0.0048 0.000708206814 0.0045 0.0255703958010256 0 0.00799412915500799 0.00340568672800341 0.00507375386098478 4.70917850001884e-05 0.0101809648679593 0.001682664015 0.0064922
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
88 T[T>A]G 0.001090065693 6.6605043000333e-05 0.00656586304103283 0.0082 0.007144208769 0 0.001 0.00836254658997491 0.014 0 0 0.0037 0.000245194218 0 6e-04 0.0063 2.1133639e-05 0.00201673836100202 0.0052 9.7003127e-05 0 0.0698452180850698 0.000231525617999537 0.0112021435910112 0.0101915204010102 2.01383909999396e-05 0 0.003250427226987 0.002438756 0.0036396
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
89 T[T>A]T 0.003981022761 0.000276315891001382 0.0147121354030736 0.0045 0.010240850413 7e-04 0.005 0.027653296253917 0.0139 0.0028 8e-04 0.0094 0.000160345975 0.0012 3e-04 0.008 0.003883130589 0.00281867944700282 0.0085 0.00231348906 8e-04 0.0235790617970236 0 0.000270578768000271 0.0145275393130145 0.00123553846999629 0.00192977081300772 0.016492812255934 0 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
90 T[T>C]A 0.008073616351 0.00010193235200051 0.00911549507704558 0.0028 0.017059640976 0.0059 0.0023 0.0049010723789853 0.0156 0.003 2e-04 0.05 0.000784056118 0.0018 0.0068 0.0246 0.001708586711 0.000302303565000302 0.0052 0.005734229562 0.0389 0.0048036697400048 0 0.00168229104800168 0.0145150500900145 0.0287896805419136 0.00172101527700688 0.00992955206796028 0.011498665964 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
91 T[T>C]C 0.004857381178 0.000470343659002352 0.0109537909320548 0.0016 0.014195709147 0.0035 0.0018 0.00608101129898176 0.0137 0.0097 9e-04 0.0342 0.000132974888 0.0056 0.0099 0.0183 0.011074152072 0.00626079111500626 0.002 0.011234254668 0.0313 0.000912157512000912 0.000230608943999539 0.00234452765600234 0.00740608345700741 0.0366394924418901 0.00348921255301396 0.029010563205884 0.003584215038 0.0091481
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
92 T[T>C]G 0.008325454207 0.000192354203000962 0.00611303321903056 0.0036 0.012596501722 0.0106 0.0019 0.00171248469899486 0.0098 0.0065 7e-04 0.032 3.7402404e-05 0.0034 0.0039 0.0165 0.005932002763 0.00154126532900154 0.0057 0.023767611345 0.0249 0.00178173568000178 0.000239513774999521 0.000481274164000481 0.00489253121700489 0.0191436942799426 0.00115284658100461 0.0156832185569373 0.00169429667 0.0060004
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
93 T[T>C]T 0.006257105605 0.000585330275002927 0.0107743362590539 0.0022 0.017375139145 0.0029 0.0024 0.01000344182997 0.0309 0.0099 5e-04 0.0371 0.000179702846 0.0026 0.0047 0.0174 0.007208218396 0.00135779708900136 0.0038 0.005395186301 0.0274 0 0 0.000358148002000358 0.017014780759017 0.0230716888309308 0.00152795700300611 0.0172915636179308 0.003799705772 0
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
94 T[T>G]A 0.001397553749 7.17369500003587e-05 0.00542718424102714 0 0.00520287442 9e-04 0 0.00174322136199477 0.0502 0.005 0 0.0019 0.000546581847 0 0 0.0068 0.000133410642 3.63184040000363e-05 0.0032 2.69147e-07 0 0.00165169876100165 0 0 0.00208147992700208 8.53493499997439e-06 0.00118902245400476 0.00938965870596244 0 0.0086563
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
95 T[T>G]C 0.001291736985 1.42814560000714e-05 0.0061602504230308 3e-04 0.005131607914 0.0019 0.001 0.00254983832899235 0.0081 0.0092 0 0.0027 0.000235347085 0.0015 4e-04 0.0069 0.009613345245 0.00323383799000323 0.0018 0.000377234437 0.0018 0 0 0 0.000578978775000579 0.00271850984499184 0.000280295354001121 0.0301170769838795 0 0.0043282
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
96 T[T>G]G 0.00203107688 0.000206615168001033 0.0110765262610554 0.003 0.0060552541 0.0011 0.001 0.00603039518498191 0.0088 0.0022 3e-04 0.0011 4.79022e-07 2e-04 9e-04 0.0049 0.004522462318 0.000754601773000755 0.0011 0.000515421599 3e-04 0.00257275195800257 0.000247501932999505 0.00136050485000136 0.00942919588500943 0.00136916117299589 0.00235305558900941 0.0126987508109492 0.000353695951 0.0082628
8c6ee1c2248f "planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/mutational_patterns commit e5d498dfc5a6a9aaea3d09037dea5d15c2d85dd2"
artbio
parents:
diff changeset
97 T[T>G]T 0.00403012816 2.3598204000118e-05 0.013000984209065 0.0011 0.013369935834 0.0072 0.0014 0.00722399889297833 0.0545 0.0633 3e-04 0.0032 0.000670588327 0.0025 0.0033 0.0163 0.05804040776 0.00212644153200213 0.0013 0.000615656691 3e-04 0 0 6.95157780000695e-05 0.00786967157700787 0.0025680767259923 0.000139561285000558 0.233659783275065 0.006104834136 0