Mercurial > repos > artbio > repenrich
diff test-data/edgeR_result_file.tab @ 2:15e3e29f310e draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/repenrich commit c89c33e5ea8fc63f3ea5c0f66ebc5fa822ac734b
| author | artbio |
|---|---|
| date | Tue, 19 Sep 2017 17:23:15 -0400 |
| parents | f6f0f1e5e940 |
| children | 6bba3e33c2e7 |
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--- a/test-data/edgeR_result_file.tab Mon Sep 18 17:22:07 2017 -0400 +++ b/test-data/edgeR_result_file.tab Tue Sep 19 17:23:15 2017 -0400 @@ -52,9 +52,9 @@ TAHRE -0.509503033739914 0.0198535740576507 LINE Jockey Gypsy8_I-int -0.578276897527121 0.0248976847994314 LTR Gypsy BLASTOPIA_I-int 0.796987753936179 0.0301824235833205 LTR Gypsy -Gypsy11_I-int -0.734634622561586 0.0432538714324547 LTR Gypsy +DM176_LTR -0.691384671506076 0.0432538714324547 LTR Gypsy DMRT1A -0.509608409844153 0.0432538714324547 LINE R1 -DM176_LTR -0.691384671506076 0.0432538714324547 LTR Gypsy +Gypsy11_I-int -0.734634622561586 0.0432538714324547 LTR Gypsy QUASIMODO2-I_DM 0.470057940126177 0.044414105251971 LTR Gypsy MuDR-1_DEl 1.35524442785064 0.0532319546519159 DNA MULE-NOF DM1731_LTR 0.752238181600754 0.0540130070646644 LTR Copia @@ -71,14 +71,14 @@ BATUMI_LTR -0.625598883331715 0.112325719453317 LTR Pao Gypsy2-I_DM 0.418860685191156 0.127538985839499 LTR Gypsy Invader3_LTR -0.553726127316243 0.130228544874336 LTR Gypsy +MDG3_I-int 0.417195433411295 0.130837858091619 LTR Gypsy SSU-rRNA_Dme 0.50182621141568 0.130837858091619 rRNA rRNA -MDG3_I-int 0.417195433411295 0.130837858091619 LTR Gypsy G5A_DM -0.468375220785066 0.142388172856184 LINE Jockey S2_DM -0.576444154651051 0.154380925206633 DNA TcMar-Tc1 Stalker2_I-int -0.424817076156048 0.157921464286182 LTR Gypsy -R1-2_DM -0.611853226580459 0.158635278613665 LINE R1 BLOOD_LTR 0.494999752604753 0.158635278613665 LTR Gypsy Invader5_LTR -0.675984091871337 0.158635278613665 LTR Gypsy +R1-2_DM -0.611853226580459 0.158635278613665 LINE R1 Transib5 -0.51646991193603 0.158635278613665 DNA CMC-Transib TLD2 -1.24823548505769 0.158665416598185 LTR Gypsy TC1_DM 0.400572910860442 0.167626897114732 DNA TcMar-Tc1 @@ -92,53 +92,53 @@ POGON1 0.482507112501569 0.255779427421414 DNA TcMar-Pogo HOBO -0.283220815078204 0.273166685685814 DNA hAT-hobo BS3_DM -0.418041606433149 0.277910060681416 LINE Jockey +Gypsy9_I-int -0.437336296478435 0.280951304168472 LTR Gypsy P-1_DY 0.969417874734635 0.280951304168472 DNA P -Gypsy9_I-int -0.437336296478435 0.280951304168472 LTR Gypsy Bica_I-int -0.363151852276854 0.287621291763315 LTR Gypsy DMCR1A -0.342108879038489 0.320538100201906 LINE CR1 Mariner2_DM -0.422114252836712 0.320538100201906 DNA TcMar-Tc1 +Gypsy7_LTR -0.484940393339899 0.322658401361327 LTR Gypsy TRANSIB3 0.344232145502121 0.322658401361327 DNA CMC-Transib -Gypsy7_LTR -0.484940393339899 0.322658401361327 LTR Gypsy DMRPR 0.474671090698546 0.369600785239272 Unknown Unknown DIVER2_LTR -0.381362071713278 0.384462351162869 LTR Pao Gypsy1-LTR_DM 0.341547880045558 0.384860099197221 LTR Gypsy +DOC4_DM 0.362114244909638 0.389414554540185 LINE Jockey SSU-rRNA_Cel 0.268693361351043 0.389414554540185 rRNA rRNA -DOC4_DM 0.362114244909638 0.389414554540185 LINE Jockey ZAM_I-int 0.25296287202699 0.397202788288282 LTR Gypsy XDMR_DM -0.256211211677393 0.408914532732159 Unknown Unknown Chimpo_LTR -0.460515218470088 0.409319591327129 LTR Gypsy +5S_DM -0.36064468671157 0.412039231991319 RNA RNA +BLOOD_I-int 0.301193505006723 0.412039231991319 LTR Gypsy +CIRCE -0.21220098912431 0.412039231991319 LTR Gypsy DOC2_DM -0.219218822289782 0.412039231991319 LINE Jockey -PROTOP -0.21894181311432 0.412039231991319 DNA P -HETA -0.298692871636692 0.412039231991319 LINE Jockey HELENA_RT 0.306716860759321 0.412039231991319 LINE Jockey +HETA -0.298692871636692 0.412039231991319 LINE Jockey Invader2_LTR -0.349451178427879 0.412039231991319 LTR Gypsy -BLOOD_I-int 0.301193505006723 0.412039231991319 LTR Gypsy -5S_DM -0.36064468671157 0.412039231991319 RNA RNA -CIRCE -0.21220098912431 0.412039231991319 LTR Gypsy +PROTOP -0.21894181311432 0.412039231991319 DNA P ACCORD2_LTR -0.373877436518785 0.415323684742582 LTR Gypsy BARI1 -0.361825471165769 0.439062969216072 DNA TcMar-Tc1 Copia2_I-int -0.199651272204726 0.454016393978291 LTR Copia Chouto_LTR -0.42256718750228 0.457631460799645 LTR Gypsy S_DM 0.193275098711318 0.466588891242574 DNA TcMar-Tc1 +Chimpo_I-int -0.3198026895528 0.469668398060595 LTR Gypsy +Gypsy2_LTR 0.337405927915915 0.469668398060595 LTR Gypsy Gypsy6_I-int 0.244887845096584 0.469668398060595 LTR Gypsy NOMAD_LTR -0.310707505731374 0.469668398060595 LTR Gypsy -Chimpo_I-int -0.3198026895528 0.469668398060595 LTR Gypsy -Gypsy2_LTR 0.337405927915915 0.469668398060595 LTR Gypsy DIVER2_I-int -0.217400353167491 0.482143273163041 LTR Pao DOC3_DM -0.226748306440889 0.495640056965812 LINE Jockey XDMR 0.249633734746355 0.503551868695532 Unknown Unknown ROO_I-int 0.276608752749181 0.50509162020251 LTR Pao BURDOCK_LTR 0.32676718204459 0.510777537217992 LTR Gypsy BEL_I-int 0.237362494177496 0.533794803142695 LTR Pao +Invader6_I-int -0.205266937253198 0.533794803142695 LTR Gypsy ROOA_I-int -0.194233478923581 0.533794803142695 LTR Pao -Invader6_I-int -0.205266937253198 0.533794803142695 LTR Gypsy +DIVER_LTR 0.271030983517942 0.536617484807809 LTR Pao DOC6_DM 0.222079405295424 0.536617484807809 LINE Jockey -DIVER_LTR 0.271030983517942 0.536617484807809 LTR Pao GTWIN_I-int 0.193808394449743 0.536617484807809 LTR Gypsy MAX_LTR -0.257749452683052 0.540151898310569 LTR Pao -Transib-N1_DM -0.285359544492984 0.568470618173646 DNA CMC-Transib +Gypsy10_I-int -0.188834668589015 0.568470618173646 LTR Gypsy Gypsy11_LTR -0.304519901682671 0.568470618173646 LTR Gypsy -Gypsy10_I-int -0.188834668589015 0.568470618173646 LTR Gypsy +Transib-N1_DM -0.285359544492984 0.568470618173646 DNA CMC-Transib Gypsy8_LTR -0.22930840819102 0.572155988619062 LTR Gypsy MDG1_LTR -0.222278232633914 0.598330807400594 LTR Gypsy ARS406_DM -0.253969785738388 0.616310720408007 Unknown Unknown @@ -146,48 +146,48 @@ Invader3_I-int -0.138005789457227 0.63087021446348 LTR Gypsy FW2_DM 0.18134923098773 0.631976090641453 LINE Jockey Gypsy9_LTR -0.341386719736692 0.637388403082853 LTR Gypsy +PROTOP_A 0.129470019526978 0.641582941744779 DNA P TART-A 0.137000662462686 0.641582941744779 LINE Jockey -PROTOP_A 0.129470019526978 0.641582941744779 DNA P +Invader2_I-int -0.151224307192946 0.653366733778121 LTR Gypsy MDG3_LTR -0.188668582948884 0.653366733778121 LTR Gypsy -Invader2_I-int -0.151224307192946 0.653366733778121 LTR Gypsy Jockey2 -0.162959614427421 0.6545684300628 LINE Jockey POGO -0.150727724968995 0.655487951511946 DNA TcMar-Pogo Baggins1 -0.134826103211095 0.693165877070164 LINE LOA -Stalker3_LTR -0.174018068430168 0.707635948527852 LTR Gypsy Bica_LTR -0.203027970314789 0.707635948527852 LTR Gypsy HMSBEAGLE_I-int 0.13884460350775 0.707635948527852 LTR Gypsy +Stalker3_LTR -0.174018068430168 0.707635948527852 LTR Gypsy +NTS_DM -0.176552072990723 0.7126900116144 Other Other TABOR_LTR -0.243243320673685 0.7126900116144 LTR Gypsy -NTS_DM -0.176552072990723 0.7126900116144 Other Other ZAM_LTR 0.185889162361338 0.717882303973929 LTR Gypsy G5_DM -0.112256553949312 0.728328879400999 LINE Jockey -QUASIMODO_I-int 0.126271255526405 0.756425760962704 LTR Gypsy +BEL_LTR 0.152542861711851 0.756425760962704 LTR Pao FB4_DM -0.114616335459739 0.756425760962704 DNA TcMar-Tc1 Invader1_LTR 0.141219962488351 0.756425760962704 LTR Gypsy -BEL_LTR 0.152542861711851 0.756425760962704 LTR Pao +QUASIMODO_I-int 0.126271255526405 0.756425760962704 LTR Gypsy DMRT1B -0.111235216287692 0.760051744799183 LINE R1 NOMAD_I-int -0.137546703453753 0.760051744799183 LTR Gypsy LmeSINE1c -0.228543531933743 0.760296029745035 SINE tRNA-Deu-L2 +Copia2_LTR_DM 0.147979193864449 0.76240178289376 LTR Copia Gypsy10_LTR -0.154651074858764 0.76240178289376 LTR Gypsy QUASIMODO2-LTR_DM -0.155430480903998 0.76240178289376 LTR Gypsy -Copia2_LTR_DM 0.147979193864449 0.76240178289376 LTR Copia BS4_DM -0.253251631796478 0.81092436860891 LINE Jockey G_DM 0.0902785903431559 0.81092436860891 LINE Jockey IVK_DM -0.0807211765160779 0.818709085450591 LINE I +Gypsy12_LTR -0.0832045482918072 0.835273508731359 LTR Gypsy Gypsy5_I-int -0.0774807293903186 0.835273508731359 LTR Gypsy -Gypsy12_LTR -0.0832045482918072 0.835273508731359 LTR Gypsy Gypsy6A_LTR -0.116239966704279 0.835273508731359 LTR Gypsy IDEFIX_I-int 0.0781972363147815 0.835273508731359 LTR Gypsy +DMRP1 0.100504519100353 0.846311908195535 Unknown Unknown PROTOP_B -0.0745501769371703 0.846311908195535 DNA P -DMRP1 0.100504519100353 0.846311908195535 Unknown Unknown Copia1-LTR_DM -0.0961752276665428 0.850550157756311 LTR Copia TC1-2_DM 0.0595720035046981 0.853067020850826 DNA TcMar-Tc1 +Gypsy7_I-int 0.0826410967604942 0.861339242519926 LTR Gypsy LSU-rRNA_Cel -0.0920825033469626 0.861339242519926 rRNA rRNA -Gypsy7_I-int 0.0826410967604942 0.861339242519926 LTR Gypsy -Gypsy5_LTR -0.0710979993807782 0.905487490633946 LTR Gypsy +DMLTR5 0.0726894766496021 0.905487490633946 LTR Gypsy +Gypsy2-LTR_DM 0.0652192786223383 0.905487490633946 LTR Gypsy Gypsy4_I-int -0.0516274039610208 0.905487490633946 LTR Gypsy +Gypsy5_LTR -0.0710979993807782 0.905487490633946 LTR Gypsy QUASIMODO_LTR -0.0643467685962964 0.905487490633946 LTR Gypsy -Gypsy2-LTR_DM 0.0652192786223383 0.905487490633946 LTR Gypsy -DMLTR5 0.0726894766496021 0.905487490633946 LTR Gypsy Stalker2_LTR -0.0523210063310555 0.917308330496379 LTR Gypsy ROVER-I_DM -0.0408110836395496 0.922716163337686 LTR Gypsy MDG1_I-int -0.0411424164719924 0.937452811422426 LTR Gypsy @@ -196,10 +196,10 @@ BARI_DM 0.0372716083617889 0.949850971355763 DNA TcMar-Tc1 Gypsy2_I-int -0.0261599267227275 0.951965771983562 LTR Gypsy DMTOM1_LTR 0.0349640382618226 0.953829042793374 LTR Gypsy +Gypsy3_LTR -0.0298883238815861 0.957715681080923 LTR Gypsy IDEFIX_LTR 0.0219961145617681 0.957715681080923 LTR Gypsy +MINOS 0.0330479824589295 0.957715681080923 DNA TcMar-Tc1 STALKER4_I-int 0.0241275307638275 0.957715681080923 LTR Gypsy -Gypsy3_LTR -0.0298883238815861 0.957715681080923 LTR Gypsy -MINOS 0.0330479824589295 0.957715681080923 DNA TcMar-Tc1 G2_DM 0.0226097987515835 0.962242582647045 LINE Jockey Copia1-I_DM 0.0124236833262227 0.963045943681341 LTR Copia Invader4_LTR 0.016495431966038 0.963045943681341 LTR Gypsy