Mercurial > repos > artbio > repenrich
diff test-data/chrY_paired_fraction_counts.tab @ 13:530626b0757c draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/main/tools/repenrich commit df6b9491ad06e8a85e67c663b68db3cce3eb0115
| author | artbio |
|---|---|
| date | Tue, 02 Apr 2024 21:16:37 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/chrY_paired_fraction_counts.tab Tue Apr 02 21:16:37 2024 +0000 @@ -0,0 +1,145 @@ +A-rich Low_complexity Low_complexity 0.0 +ACCORD2_I-int LTR Gypsy 0.0 +ACCORD2_LTR LTR Gypsy 0.0 +ACCORD_I-int LTR Gypsy 0.0 +BARI1 DNA TcMar-Tc1 0.0 +BATUMI_LTR LTR Pao 0.0 +BS LINE Jockey 0.0 +BS2 LINE Jockey 50.0 +BURDOCK_I-int LTR Gypsy 0.0 +Baggins1 LINE LOA 0.0 +Bica_I-int LTR Gypsy 36.0 +Bica_LTR LTR Gypsy 1.0 +CIRCE LTR Gypsy 0.0 +Chouto_I-int LTR Gypsy 3.0 +Copia1-I_DM LTR Copia 0.0 +Copia_I-int LTR Copia 20956.0 +Copia_LTR LTR Copia 270.0 +DIVER2_I-int LTR Pao 0.0 +DIVER2_LTR LTR Pao 1.0 +DM1731_I-int LTR Copia 0.0 +DM1731_LTR LTR Copia 0.0 +DM176_I-int LTR Gypsy 0.0 +DM412 LTR Gypsy 2.0 +DM412B_LTR LTR Gypsy 0.0 +DMCR1A LINE CR1 0.0 +DMLTR5 LTR Gypsy 0.0 +DMRT1A LINE R1 0.0 +DMRT1B LINE R1 106.0 +DMRT1C LINE R1 0.0 +DNAREP1_DM RC Helitron 0.0 +DOC2_DM LINE Jockey 0.0 +DOC3_DM LINE Jockey 0.0 +FB4_DM DNA TcMar-Tc1 4.0 +FROGGER_I-int LTR Copia 0.0 +FW2_DM LINE Jockey 0.0 +G3_DM LINE Jockey 0.0 +G5A_DM LINE Jockey 0.0 +G5_DM LINE Jockey 0.0 +G6_DM LINE Jockey 0.0 +GA-rich Low_complexity Low_complexity 0.0 +GTWIN_I-int LTR Gypsy 9.0 +G_DM LINE Jockey 0.0 +Gypsy11_I-int LTR Gypsy 0.0 +Gypsy11_LTR LTR Gypsy 0.0 +Gypsy12_LTR LTR Gypsy 0.0 +Gypsy2-I_DM LTR Gypsy 0.0 +Gypsy2-LTR_DM LTR Gypsy 0.0 +Gypsy3_LTR LTR Gypsy 0.0 +Gypsy4_I-int LTR Gypsy 0.0 +Gypsy5_I-int LTR Gypsy 0.0 +Gypsy6A_LTR LTR Gypsy 1.0 +Gypsy6_I-int LTR Gypsy 26.0 +Gypsy8_I-int LTR Gypsy 0.0 +Gypsy8_LTR LTR Gypsy 0.0 +Gypsy9_I-int LTR Gypsy 0.0 +Gypsy_I-int LTR Gypsy 24.0 +Gypsy_LTR LTR Gypsy 0.0 +HELENA_RT LINE Jockey 0.0 +HETA LINE Jockey 24.0 +HMSBEAGLE_I-int LTR Gypsy 0.0 +IDEFIX_I-int LTR Gypsy 1.0 +IDEFIX_LTR LTR Gypsy 0.0 +Invader1_I-int LTR Gypsy 0.0 +Invader1_LTR LTR Gypsy 0.0 +Invader2_I-int LTR Gypsy 0.0 +Invader4_I-int LTR Gypsy 0.0 +Invader4_LTR LTR Gypsy 0.0 +Invader5_I-int LTR Gypsy 0.0 +Invader5_LTR LTR Gypsy 0.0 +Invader6_I-int LTR Gypsy 0.0 +Invader6_LTR LTR Gypsy 0.0 +MAX_I-int LTR Pao 22.0 +MAX_LTR LTR Pao 0.0 +MDG1_I-int LTR Gypsy 0.0 +MDG1_LTR LTR Gypsy 0.0 +MDG3_I-int LTR Gypsy 92.0 +MDG3_LTR LTR Gypsy 1.0 +MICROPIA_I-int LTR Gypsy 40.0 +MICROPIA_LTR LTR Gypsy 2.0 +Mariner2_DM DNA TcMar-Tc1 0.0 +NINJA_I-int LTR Pao 0.0 +NOMAD_I-int LTR Gypsy 0.0 +PROTOP_A DNA P 27.0 +PROTOP_B DNA P 0.0 +QUASIMODO2-I_DM LTR Gypsy 24.0 +QUASIMODO2-LTR_DM LTR Gypsy 0.0 +QUASIMODO_I-int LTR Gypsy 85.5 +QUASIMODO_LTR LTR Gypsy 14.5 +R1_DM LINE R1 0.0 +ROOA_I-int LTR Pao 0.0 +ROOA_LTR LTR Pao 0.0 +ROVER-I_DM LTR Gypsy 286.0 +ROVER-LTR_DM LTR Gypsy 2.0 +S2_DM DNA TcMar-Tc1 0.0 +STALKER4_I-int LTR Gypsy 133.0 +STALKER4_LTR LTR Gypsy 22.0 +S_DM DNA TcMar-Tc1 4.0 +Stalker2_I-int LTR Gypsy 69.0 +Stalker2_LTR LTR Gypsy 2.0 +TART-A LINE Jockey 4.0 +TART_B1 LINE Jockey 13.0 +TC1-2_DM DNA TcMar-Tc1 0.0 +TC1_DM DNA TcMar-Tc1 0.0 +TLD2 LTR Gypsy 0.0 +TRANSIB1 DNA CMC-Transib 0.0 +TRANSIB2 DNA CMC-Transib 18.0 +ZAM_I-int LTR Gypsy 0.0 +_AACACA_n Simple_repeat Simple_repeat 0.0 +_AAT_n Simple_repeat Simple_repeat 0.0 +_ACAATAG_n Simple_repeat Simple_repeat 0.0 +_ACC_n Simple_repeat Simple_repeat 0.0 +_AGAGAAG_n Simple_repeat Simple_repeat 2.5 +_AGAGA_n Simple_repeat Simple_repeat 33.5 +_ATAAT_n Simple_repeat Simple_repeat 0.0 +_ATATATT_n Simple_repeat Simple_repeat 0.0 +_ATATTAT_n Simple_repeat Simple_repeat 0.0 +_ATTTTT_n Simple_repeat Simple_repeat 0.0 +_ATT_n Simple_repeat Simple_repeat 0.0 +_AT_n Simple_repeat Simple_repeat 0.0 +_A_n Simple_repeat Simple_repeat 0.0 +_CATA_n Simple_repeat Simple_repeat 0.0 +_CTTTT_n Simple_repeat Simple_repeat 0.0 +_GAGAA_n Simple_repeat Simple_repeat 38.0 +_GCCTTT_n Simple_repeat Simple_repeat 3.0 +_TAATAT_n Simple_repeat Simple_repeat 0.0 +_TAATA_n Simple_repeat Simple_repeat 0.0 +_TATAAAA_n Simple_repeat Simple_repeat 0.0 +_TATAA_n Simple_repeat Simple_repeat 0.0 +_TATCATG_n Simple_repeat Simple_repeat 0.0 +_TA_n Simple_repeat Simple_repeat 0.0 +_TGTTG_n Simple_repeat Simple_repeat 0.0 +_TTATATA_n Simple_repeat Simple_repeat 0.0 +_TTATAT_n Simple_repeat Simple_repeat 0.0 +_TTATA_n Simple_repeat Simple_repeat 0.0 +_TTA_n Simple_repeat Simple_repeat 0.0 +_TTCTT_n Simple_repeat Simple_repeat 0.0 +_TTC_n Simple_repeat Simple_repeat 0.0 +_TTTAT_n Simple_repeat Simple_repeat 0.0 +_TTTA_n Simple_repeat Simple_repeat 0.0 +_TTTC_n Simple_repeat Simple_repeat 0.0 +_TTTGA_n Simple_repeat Simple_repeat 0.0 +_TTTTAG_n Simple_repeat Simple_repeat 0.0 +_TTTTCTT_n Simple_repeat Simple_repeat 0.0 +_TTTTC_n Simple_repeat Simple_repeat 0.0 +_T_n Simple_repeat Simple_repeat 0.0