Mercurial > repos > artbio > rsem

comparison rsem-bwt2.xml @ 6:45a30e216fec draft

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planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 4bc762d0932b87d4e91ce76bc3eeb52f0b8d3bc6
author artbio
date Sun, 03 Jun 2018 19:50:57 -0400
parents 835a2f3372b5
children 585c6120dca0
comparison
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5:835a2f3372b5 6:45a30e216fec
369 <has_text text="ebola" /> 369 <has_text text="ebola" />
370 </assert_contents> 370 </assert_contents>
371 </output> 371 </output>
372 <output name="gene_abundances" value="paired_refgen_gene_abundances.bt2.tab"/> 372 <output name="gene_abundances" value="paired_refgen_gene_abundances.bt2.tab"/>
373 <output name="isoform_abundances" value="paired_refgen_isoform_abundances.bt2.tab" /> 373 <output name="isoform_abundances" value="paired_refgen_isoform_abundances.bt2.tab" />
374 <output name="transcript_sorted_bam" value="paired_refgen_transcripts.bt2.bam" ftype="bam" lines_diff="2" /> 374 <output name="transcript_sorted_bam" value="paired_refgen_transcripts.bt2.bam" ftype="bam" lines_diff="4" />
375 <output name="genome_sorted_bam" value="paired_refgen_isoform_abundances.bt2.bam" ftype="bam" lines_diff="2" /> 375 <output name="genome_sorted_bam" value="paired_refgen_isoform_abundances.bt2.bam" ftype="bam" lines_diff="4" />
376 <output name="log"> 376 <output name="log">
377 <assert_contents> 377 <assert_contents>
378 <has_text text="Expression Results are written" /> 378 <has_text text="Expression Results are written" />
379 </assert_contents> 379 </assert_contents>
380 </output> 380 </output>