Mercurial > repos > artbio > rsem

comparison rsem.xml @ 6:45a30e216fec draft

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planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 4bc762d0932b87d4e91ce76bc3eeb52f0b8d3bc6
author artbio
date Sun, 03 Jun 2018 19:50:57 -0400
parents 835a2f3372b5
children 585c6120dca0
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5:835a2f3372b5 6:45a30e216fec
376 <has_text text="ebola" /> 376 <has_text text="ebola" />
377 </assert_contents> 377 </assert_contents>
378 </output> 378 </output>
379 <output name="gene_abundances" value="paired_refgen_gene_abundances.bt.tab"/> 379 <output name="gene_abundances" value="paired_refgen_gene_abundances.bt.tab"/>
380 <output name="isoform_abundances" value="paired_refgen_isoform_abundances.bt.tab" /> 380 <output name="isoform_abundances" value="paired_refgen_isoform_abundances.bt.tab" />
381 <output name="transcript_sorted_bam" value="paired_refgen_transcripts.bt.bam" ftype="bam" lines_diff="2" /> 381 <output name="transcript_sorted_bam" value="paired_refgen_transcripts.bt.bam" ftype="bam" lines_diff="4" />
382 <output name="genome_sorted_bam" value="paired_refgen_isoform_abundances.bt.bam" ftype="bam" lines_diff="2" /> 382 <output name="genome_sorted_bam" value="paired_refgen_isoform_abundances.bt.bam" ftype="bam" lines_diff="4" />
383 <output name="log"> 383 <output name="log">
384 <assert_contents> 384 <assert_contents>
385 <has_text text="Expression Results are written" /> 385 <has_text text="Expression Results are written" />
386 </assert_contents> 386 </assert_contents>
387 </output> 387 </output>