Mercurial > repos > artbio > rsem

comparison test-data/eboVir3.gtf @ 5:835a2f3372b5 draft

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planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 5bb908607e13ccad44d768e786253ce7b5c626f8
author artbio
date Sat, 02 Jun 2018 06:10:54 -0400
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comparison
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4:1823c8e07d96 5:835a2f3372b5
1 KM034562v1 eboVir3_ncbiGene start_codon 470 472 0.000000 + . gene_id "NP"; transcript_id "NP";
2 KM034562v1 eboVir3_ncbiGene CDS 470 2686 0.000000 + 0 gene_id "NP"; transcript_id "NP";
3 KM034562v1 eboVir3_ncbiGene stop_codon 2687 2689 0.000000 + . gene_id "NP"; transcript_id "NP";
4 KM034562v1 eboVir3_ncbiGene exon 56 3026 0.000000 + . gene_id "NP"; transcript_id "NP";
5 KM034562v1 eboVir3_ncbiGene start_codon 3129 3131 0.000000 + . gene_id "VP35"; transcript_id "VP35";
6 KM034562v1 eboVir3_ncbiGene CDS 3129 4148 0.000000 + 0 gene_id "VP35"; transcript_id "VP35";
7 KM034562v1 eboVir3_ncbiGene stop_codon 4149 4151 0.000000 + . gene_id "VP35"; transcript_id "VP35";
8 KM034562v1 eboVir3_ncbiGene exon 3032 4407 0.000000 + . gene_id "VP35"; transcript_id "VP35";
9 KM034562v1 eboVir3_ncbiGene start_codon 4479 4481 0.000000 + . gene_id "VP40"; transcript_id "VP40";
10 KM034562v1 eboVir3_ncbiGene CDS 4479 5456 0.000000 + 0 gene_id "VP40"; transcript_id "VP40";
11 KM034562v1 eboVir3_ncbiGene stop_codon 5457 5459 0.000000 + . gene_id "VP40"; transcript_id "VP40";
12 KM034562v1 eboVir3_ncbiGene exon 4390 5894 0.000000 + . gene_id "VP40"; transcript_id "VP40";
13 KM034562v1 eboVir3_ncbiGene start_codon 6039 6041 0.000000 + . gene_id "GP"; transcript_id "GP";
14 KM034562v1 eboVir3_ncbiGene CDS 6039 6920 0.000000 + 0 gene_id "GP"; transcript_id "GP";
15 KM034562v1 eboVir3_ncbiGene exon 5900 6920 0.000000 + . gene_id "GP"; transcript_id "GP";
16 KM034562v1 eboVir3_ncbiGene CDS 6923 8065 0.000000 + 0 gene_id "GP"; transcript_id "GP";
17 KM034562v1 eboVir3_ncbiGene stop_codon 8066 8068 0.000000 + . gene_id "GP"; transcript_id "GP";
18 KM034562v1 eboVir3_ncbiGene exon 6923 8305 0.000000 + . gene_id "GP"; transcript_id "GP";
19 KM034562v1 eboVir3_ncbiGene start_codon 6039 6041 0.000000 + . gene_id "sGP"; transcript_id "sGP";
20 KM034562v1 eboVir3_ncbiGene CDS 6039 7130 0.000000 + 0 gene_id "sGP"; transcript_id "sGP";
21 KM034562v1 eboVir3_ncbiGene stop_codon 7131 7133 0.000000 + . gene_id "sGP"; transcript_id "sGP";
22 KM034562v1 eboVir3_ncbiGene exon 5900 8305 0.000000 + . gene_id "sGP"; transcript_id "sGP";
23 KM034562v1 eboVir3_ncbiGene start_codon 6039 6041 0.000000 + . gene_id "ssGP"; transcript_id "ssGP";
24 KM034562v1 eboVir3_ncbiGene CDS 6039 6922 0.000000 + 0 gene_id "ssGP"; transcript_id "ssGP";
25 KM034562v1 eboVir3_ncbiGene exon 5900 6922 0.000000 + . gene_id "ssGP"; transcript_id "ssGP";
26 KM034562v1 eboVir3_ncbiGene CDS 6924 6930 0.000000 + 1 gene_id "ssGP"; transcript_id "ssGP";
27 KM034562v1 eboVir3_ncbiGene stop_codon 6931 6933 0.000000 + . gene_id "ssGP"; transcript_id "ssGP";
28 KM034562v1 eboVir3_ncbiGene exon 6924 8305 0.000000 + . gene_id "ssGP"; transcript_id "ssGP";
29 KM034562v1 eboVir3_ncbiGene start_codon 8509 8511 0.000000 + . gene_id "VP30"; transcript_id "VP30";
30 KM034562v1 eboVir3_ncbiGene CDS 8509 9372 0.000000 + 0 gene_id "VP30"; transcript_id "VP30";
31 KM034562v1 eboVir3_ncbiGene stop_codon 9373 9375 0.000000 + . gene_id "VP30"; transcript_id "VP30";
32 KM034562v1 eboVir3_ncbiGene exon 8288 9740 0.000000 + . gene_id "VP30"; transcript_id "VP30";
33 KM034562v1 eboVir3_ncbiGene start_codon 10345 10347 0.000000 + . gene_id "VP24"; transcript_id "VP24";
34 KM034562v1 eboVir3_ncbiGene CDS 10345 11097 0.000000 + 0 gene_id "VP24"; transcript_id "VP24";
35 KM034562v1 eboVir3_ncbiGene stop_codon 11098 11100 0.000000 + . gene_id "VP24"; transcript_id "VP24";
36 KM034562v1 eboVir3_ncbiGene exon 9885 11518 0.000000 + . gene_id "VP24"; transcript_id "VP24";
37 KM034562v1 eboVir3_ncbiGene start_codon 11581 11583 0.000000 + . gene_id "L"; transcript_id "L";
38 KM034562v1 eboVir3_ncbiGene CDS 11581 18216 0.000000 + 0 gene_id "L"; transcript_id "L";
39 KM034562v1 eboVir3_ncbiGene stop_codon 18217 18219 0.000000 + . gene_id "L"; transcript_id "L";
40 KM034562v1 eboVir3_ncbiGene exon 11501 18282 0.000000 + . gene_id "L"; transcript_id "L";