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comparison macros.xml @ 8:f6fc9b92d629 draft

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"planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit edd1ee51a72f1701ba2a89fc9821ec1ec2b3973c"
author artbio
date Sun, 05 Jan 2020 16:40:13 -0500
parents 585c6120dca0
children e00a79cf5f8c
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7:585c6120dca0 8:f6fc9b92d629
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@WRAPPER_VERSION@">0.9.0</token> 3 <token name="@WRAPPER_VERSION@">1.0.0</token>
4 <xml name="requirements">
5 <requirements>
6 <requirement type="package" version="1.3.0=pl526r341h4f16992_4">rsem</requirement>
7 <requirement type="package" version="1.2.3=py37hc9558a2_0">bowtie</requirement>
8 <requirement type="package" version="2.3.5=py37he860b03_0">bowtie2</requirement>
9 </requirements>
10 </xml>
4 <xml name="rsem_options"> 11 <xml name="rsem_options">
5 <param name="seedlength" type="integer" value="25" optional="true" label="Seed length used by the read aligner" help="Providing the correct value for this parameter is important for RSEM's accuracy if the data are single-end reads. RSEM uses this value for Bowtie's seed length parameter. The minimum value is 25. (Default:25)"> 12 <param name="seedlength" type="integer" value="25" optional="true" label="Seed length used by the read aligner" help="Providing the correct value for this parameter is important for RSEM's accuracy if the data are single-end reads. RSEM uses this value for Bowtie's seed length parameter. The minimum value is 25. (Default:25)">
6 </param> 13 </param>
7 <param name="forward_prob" type="select" label="Is the library strand specific?"> 14 <param name="forward_prob" type="select" label="Is the library strand specific?">
8 <option value="0.5" selected="true">No</option> 15 <option value="0.5" selected="true">No</option>