Mercurial > repos > artbio > small_rna_maps

comparison test-data/clustering.tab @ 24:e75a10eba0a6 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/small_rna_maps commit 0293b0f9b07302ba0b71e7877be1ea7a7ed04718
author artbio
date Sun, 31 Mar 2019 20:58:21 -0400
parents 600e2498bd21
children 376fae7c9f32
comparison
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23:3ca8113cc758 24:e75a10eba0a6
1 Dataset Chromosome Chrom_length Coordinate Polarity Counts Start-End Cluster Size density 1 Dataset Chromosome Chrom_length Coordinate Polarity Counts Start-End Cluster Size density
2 input1.bam FBtr0070001 72 1 F 1 1-1 1 1.0 2 input1.bam FBtr0070001 72 1 F 1 1-17 17 0.0588235294118
3 input1.bam FBtr0070001 72 12 F 14 7-18 12 1.16666666667 3 input1.bam FBtr0070001 72 12 F 14 7-33 27 0.518518518519
4 input1.bam FBtr0070001 72 30 F 42 27-34 8 5.25 4 input1.bam FBtr0070001 72 30 F 42 27-53 27 1.55555555556
5 input1.bam FBtr0070001 72 72 F 0 72-72 1 0.0 5 input1.bam FBtr0070001 72 72 F 0 72-72 1 0.0
6 input1.bam FBtr0070533 72 1 F 1 1-1 1 1.0 6 input1.bam FBtr0070533 72 1 F 1 1-15 15 0.0666666666667
7 input1.bam FBtr0070533 72 25 F 23 12-38 27 0.851851851852 7 input1.bam FBtr0070533 72 25 F 23 12-55 44 0.522727272727
8 input1.bam FBtr0070533 72 72 F 0 72-72 1 0.0 8 input1.bam FBtr0070533 72 72 F 0 72-72 1 0.0
9 input1.bam FBtr0070603 72 21 F 68 1-42 42 1.61904761905 9 input1.bam FBtr0070603 72 21 F 68 1-62 62 1.09677419355
10 input1.bam FBtr0070603 72 53 F 2 51-56 6 0.333333333333 10 input1.bam FBtr0070603 72 53 F 2 51-71 21 0.0952380952381
11 input1.bam FBtr0070603 72 72 F 0 72-72 1 0.0 11 input1.bam FBtr0070603 72 72 F 0 72-72 1 0.0
12 input1.bam FBtr0070604 72 1 F 1 1-1 1 1.0 12 input1.bam FBtr0070604 72 1 F 1 1-15 15 0.0666666666667
13 input1.bam FBtr0070604 72 20 F 2 18-22 5 0.4 13 input1.bam FBtr0070604 72 20 F 2 18-40 23 0.0869565217391
14 input1.bam FBtr0070604 72 31 F 36 30-32 3 12.0 14 input1.bam FBtr0070604 72 31 F 36 30-53 24 1.5
15 input1.bam FBtr0070604 72 57 F 1 57-57 1 1.0 15 input1.bam FBtr0070604 72 57 F 1 57-71 15 0.0666666666667
16 input1.bam FBtr0070604 72 72 F 0 72-72 1 0.0 16 input1.bam FBtr0070604 72 72 F 0 72-72 1 0.0
17 input1.bam FBtr0070911 73 1 F 0 1-1 1 0.0 17 input1.bam FBtr0070911 73 1 F 0 1-1 1 0.0
18 input1.bam FBtr0070911 73 15 F 1 15-15 1 1.0 18 input1.bam FBtr0070911 73 15 F 1 15-35 21 0.047619047619
19 input1.bam FBtr0070911 73 38 F 1 38-38 1 1.0 19 input1.bam FBtr0070911 73 38 F 1 38-52 15 0.0666666666667
20 input1.bam FBtr0070911 73 73 F 0 73-73 1 0.0 20 input1.bam FBtr0070911 73 73 F 0 73-73 1 0.0
21 input1.bam FBtr0078490 72 1 F 0 1-1 1 0.0 21 input1.bam FBtr0078490 72 1 F 0 1-1 1 0.0
22 input1.bam FBtr0078490 72 15 F 4 13-18 6 0.666666666667 22 input1.bam FBtr0078490 72 15 F 4 13-32 20 0.2
23 input1.bam FBtr0078490 72 26 F 3 25-28 4 0.75 23 input1.bam FBtr0078490 72 26 F 3 25-50 26 0.115384615385
24 input1.bam FBtr0078490 72 38 F 1 38-38 1 1.0 24 input1.bam FBtr0078490 72 38 F 1 38-55 18 0.0555555555556
25 input1.bam FBtr0078490 72 72 F 0 72-72 1 0.0 25 input1.bam FBtr0078490 72 72 F 0 72-72 1 0.0
26 input1.bam FBtr0078580 72 16 F 1102 1-31 31 35.5483870968 26 input1.bam FBtr0078580 72 16 F 1102 1-47 47 23.4468085106
27 input1.bam FBtr0078580 72 52 F 2 52-52 1 2.0 27 input1.bam FBtr0078580 72 52 F 2 52-68 17 0.117647058824
28 input1.bam FBtr0078580 72 72 F 0 72-72 1 0.0 28 input1.bam FBtr0078580 72 72 F 0 72-72 1 0.0
29 input1.bam FBtr0078790 73 1 F 1 1-1 1 1.0 29 input1.bam FBtr0078790 73 1 F 1 1-19 19 0.0526315789474
30 input1.bam FBtr0078790 73 17 F 2 17-17 1 2.0 30 input1.bam FBtr0078790 73 17 F 2 17-32 16 0.125
31 input1.bam FBtr0078790 73 33 F 1 33-33 1 1.0 31 input1.bam FBtr0078790 73 33 F 1 33-55 23 0.0434782608696
32 input1.bam FBtr0078790 73 47 F 9 42-52 11 0.818181818182 32 input1.bam FBtr0078790 73 47 F 9 42-71 30 0.3
33 input1.bam FBtr0078790 73 69 R 1 69-69 1 1.0 33 input1.bam FBtr0078790 73 69 R 1 55-69 15 0.0666666666667
34 input1.bam FBtr0078790 73 73 F 0 73-73 1 0.0 34 input1.bam FBtr0078790 73 73 F 0 73-73 1 0.0
35 input1.bam FBtr0079064 72 2 F 2 1-3 3 0.666666666667 35 input1.bam FBtr0079064 72 2 F 2 1-23 23 0.0869565217391
36 input1.bam FBtr0079064 72 33 F 1 33-33 1 1.0 36 input1.bam FBtr0079064 72 33 F 1 33-47 15 0.0666666666667
37 input1.bam FBtr0079064 72 52 F 1 52-52 1 1.0 37 input1.bam FBtr0079064 72 52 F 1 52-68 17 0.0588235294118
38 input1.bam FBtr0079064 72 72 F 0 72-72 1 0.0 38 input1.bam FBtr0079064 72 72 F 0 72-72 1 0.0
39 input1.bam FBtr0079090 72 1 F 2 1-1 1 2.0 39 input1.bam FBtr0079090 72 1 F 2 1-28 28 0.0714285714286
40 input1.bam FBtr0079090 72 26 F 1 26-26 1 1.0 40 input1.bam FBtr0079090 72 26 F 1 26-49 24 0.0416666666667
41 input1.bam FBtr0079090 72 33 F 1 33-33 1 1.0 41 input1.bam FBtr0079090 72 33 F 1 33-48 16 0.0625
42 input1.bam FBtr0079090 72 53 F 1 53-53 1 1.0 42 input1.bam FBtr0079090 72 53 F 1 53-70 18 0.0555555555556
43 input1.bam FBtr0079090 72 56 R 1 56-56 1 1.0 43 input1.bam FBtr0079090 72 56 R 1 36-56 21 0.047619047619
44 input1.bam FBtr0079090 72 72 F 0 72-72 1 0.0 44 input1.bam FBtr0079090 72 72 F 0 72-72 1 0.0
45 input1.bam FBtr0079338 73 1 F 0 1-1 1 0.0 45 input1.bam FBtr0079338 73 1 F 0 1-1 1 0.0
46 input1.bam FBtr0079338 73 14 F 5 12-17 6 0.833333333333 46 input1.bam FBtr0079338 73 14 F 5 12-31 20 0.25
47 input1.bam FBtr0079338 73 25 F 1 25-25 1 1.0 47 input1.bam FBtr0079338 73 25 F 1 25-40 16 0.0625
48 input1.bam FBtr0079338 73 44 F 10 42-46 5 2.0 48 input1.bam FBtr0079338 73 44 F 10 42-63 22 0.454545454545
49 input1.bam FBtr0079338 73 73 F 0 73-73 1 0.0 49 input1.bam FBtr0079338 73 73 F 0 73-73 1 0.0
50 input1.bam FBtr0079528 71 9 F 97 1-18 18 5.38888888889 50 input1.bam FBtr0079528 71 9 F 97 1-38 38 2.55263157895
51 input1.bam FBtr0079528 71 28 F 1 28-28 1 1.0 51 input1.bam FBtr0079528 71 28 F 1 28-43 16 0.0625
52 input1.bam FBtr0079528 71 36 F 3 35-37 3 1.0 52 input1.bam FBtr0079528 71 36 F 3 35-54 20 0.15
53 input1.bam FBtr0079528 71 51 F 5 51-51 1 5.0 53 input1.bam FBtr0079528 71 51 F 5 51-65 15 0.333333333333
54 input1.bam FBtr0079528 71 71 F 0 71-71 1 0.0 54 input1.bam FBtr0079528 71 71 F 0 71-71 1 0.0
55 input1.bam FBtr0079596 73 10 F 148 1-19 19 7.78947368421 55 input1.bam FBtr0079596 73 10 F 148 1-33 33 4.48484848485
56 input1.bam FBtr0079596 73 53 F 4 53-54 2 2.0 56 input1.bam FBtr0079596 73 53 F 4 53-73 21 0.190476190476
57 input1.bam FBtr0079596 73 73 F 0 73-73 1 0.0 57 input1.bam FBtr0079596 73 73 F 0 73-73 1 0.0
58 input1.bam FBtr0079677 72 3 F 2 1-5 5 0.4 58 input1.bam FBtr0079677 72 3 F 2 1-23 23 0.0869565217391
59 input1.bam FBtr0079677 72 52 F 2 52-53 2 1.0 59 input1.bam FBtr0079677 72 52 F 2 52-70 19 0.105263157895
60 input1.bam FBtr0079677 72 72 F 0 72-72 1 0.0 60 input1.bam FBtr0079677 72 72 F 0 72-72 1 0.0
61 input1.bam FBtr0079690 72 1 F 1 1-1 1 1.0 61 input1.bam FBtr0079690 72 1 F 1 1-15 15 0.0666666666667
62 input1.bam FBtr0079690 72 24 F 2 22-27 6 0.333333333333 62 input1.bam FBtr0079690 72 24 F 2 22-51 30 0.0666666666667
63 input1.bam FBtr0079690 72 33 F 2 33-33 1 2.0 63 input1.bam FBtr0079690 72 33 F 2 33-49 17 0.117647058824
64 input1.bam FBtr0079690 72 72 F 0 72-72 1 0.0 64 input1.bam FBtr0079690 72 72 F 0 72-72 1 0.0
65 input1.bam FBtr0079692 73 1 F 3 1-1 1 3.0 65 input1.bam FBtr0079692 73 1 F 3 1-23 23 0.130434782609
66 input1.bam FBtr0079692 73 18 F 1 18-18 1 1.0 66 input1.bam FBtr0079692 73 18 F 1 18-35 18 0.0555555555556
67 input1.bam FBtr0079692 73 25 F 1 25-25 1 1.0 67 input1.bam FBtr0079692 73 25 F 1 25-41 17 0.0588235294118
68 input1.bam FBtr0079692 73 32 F 1 32-32 1 1.0 68 input1.bam FBtr0079692 73 32 F 1 32-51 20 0.05
69 input1.bam FBtr0079692 73 73 F 0 73-73 1 0.0 69 input1.bam FBtr0079692 73 73 F 0 73-73 1 0.0
70 input1.bam FBtr0079693 72 1 F 5 1-1 1 5.0 70 input1.bam FBtr0079693 72 1 F 5 1-24 24 0.208333333333
71 input1.bam FBtr0079693 72 25 F 1 25-25 1 1.0 71 input1.bam FBtr0079693 72 25 F 1 25-47 23 0.0434782608696
72 input1.bam FBtr0079693 72 72 F 0 72-72 1 0.0 72 input1.bam FBtr0079693 72 72 F 0 72-72 1 0.0
73 input1.bam FBtr0079694 72 1 F 5 1-1 1 5.0 73 input1.bam FBtr0079694 72 1 F 5 1-25 25 0.2
74 input1.bam FBtr0079694 72 18 F 1 18-18 1 1.0 74 input1.bam FBtr0079694 72 18 F 1 18-36 19 0.0526315789474
75 input1.bam FBtr0079694 72 52 F 1 52-52 1 1.0 75 input1.bam FBtr0079694 72 52 F 1 52-68 17 0.0588235294118
76 input1.bam FBtr0079694 72 72 F 0 72-72 1 0.0 76 input1.bam FBtr0079694 72 72 F 0 72-72 1 0.0
77 input1.bam FBtr0079702 72 1 F 1 1-1 1 1.0 77 input1.bam FBtr0079702 72 1 F 1 1-15 15 0.0666666666667
78 input1.bam FBtr0079702 72 19 F 2 19-19 1 2.0 78 input1.bam FBtr0079702 72 19 F 2 19-36 18 0.111111111111
79 input1.bam FBtr0079702 72 56 F 1 56-56 1 1.0 79 input1.bam FBtr0079702 72 56 F 1 56-70 15 0.0666666666667
80 input1.bam FBtr0079702 72 72 F 0 72-72 1 0.0 80 input1.bam FBtr0079702 72 72 F 0 72-72 1 0.0
81 input1.bam FBtr0079728 72 1 F 2 1-1 1 2.0 81 input1.bam FBtr0079728 72 1 F 2 1-17 17 0.117647058824
82 input1.bam FBtr0079728 72 8 F 1 8-8 1 1.0 82 input1.bam FBtr0079728 72 8 F 1 8-27 20 0.05
83 input1.bam FBtr0079728 72 19 F 1 19-19 1 1.0 83 input1.bam FBtr0079728 72 19 F 1 19-42 24 0.0416666666667
84 input1.bam FBtr0079728 72 33 F 3 33-33 1 3.0 84 input1.bam FBtr0079728 72 33 F 3 33-49 17 0.176470588235
85 input1.bam FBtr0079728 72 56 F 1 56-56 1 1.0 85 input1.bam FBtr0079728 72 56 F 1 56-70 15 0.0666666666667
86 input1.bam FBtr0079728 72 72 F 0 72-72 1 0.0 86 input1.bam FBtr0079728 72 72 F 0 72-72 1 0.0
87 input1.bam FBtr0079729 72 1 F 1 1-1 1 1.0 87 input1.bam FBtr0079729 72 1 F 1 1-15 15 0.0666666666667
88 input1.bam FBtr0079729 72 13 F 1 13-13 1 1.0 88 input1.bam FBtr0079729 72 13 F 1 13-34 22 0.0454545454545
89 input1.bam FBtr0079729 72 54 F 2 52-57 6 0.333333333333 89 input1.bam FBtr0079729 72 54 F 2 52-72 21 0.0952380952381
90 input1.bam FBtr0079729 72 72 F 0 72-72 1 0.0 90 input1.bam FBtr0079729 72 72 F 0 72-72 1 0.0
91 input1.bam FBtr0079752 72 1 F 2 1-1 1 2.0 91 input1.bam FBtr0079752 72 1 F 2 1-24 24 0.0833333333333
92 input1.bam FBtr0079752 72 9 F 2 7-12 6 0.333333333333 92 input1.bam FBtr0079752 72 9 F 2 7-27 21 0.0952380952381
93 input1.bam FBtr0079752 72 33 F 2 33-33 1 2.0 93 input1.bam FBtr0079752 72 33 F 2 33-49 17 0.117647058824
94 input1.bam FBtr0079752 72 52 F 2 52-52 1 2.0 94 input1.bam FBtr0079752 72 52 F 2 52-71 20 0.1
95 input1.bam FBtr0079752 72 72 F 0 72-72 1 0.0 95 input1.bam FBtr0079752 72 72 F 0 72-72 1 0.0
96 input1.bam FBtr0079820 74 1 F 0 1-1 1 0.0 96 input1.bam FBtr0079820 74 1 F 0 1-1 1 0.0
97 input1.bam FBtr0079820 74 50 F 13 45-56 12 1.08333333333 97 input1.bam FBtr0079820 74 50 F 13 45-74 30 0.433333333333
98 input1.bam FBtr0079820 74 74 F 0 74-74 1 0.0 98 input1.bam FBtr0079820 74 74 F 0 74-74 1 0.0
99 input1.bam FBtr0080609 72 10 F 60 1-20 20 3.0 99 input1.bam FBtr0080609 72 10 F 60 1-44 44 1.36363636364
100 input1.bam FBtr0080609 72 42 F 1 42-42 1 1.0 100 input1.bam FBtr0080609 72 42 F 1 42-62 21 0.047619047619
101 input1.bam FBtr0080609 72 51 F 2 51-52 2 1.0 101 input1.bam FBtr0080609 72 51 F 2 51-66 16 0.125
102 input1.bam FBtr0080609 72 72 F 0 72-72 1 0.0 102 input1.bam FBtr0080609 72 72 F 0 72-72 1 0.0
103 input1.bam FBtr0080644 72 6 F 6 1-12 12 0.5 103 input1.bam FBtr0080644 72 6 F 6 1-27 27 0.222222222222
104 input1.bam FBtr0080644 72 72 F 0 72-72 1 0.0 104 input1.bam FBtr0080644 72 72 F 0 72-72 1 0.0
105 input1.bam FBtr0080646 72 4 F 3 1-7 7 0.428571428571 105 input1.bam FBtr0080646 72 4 F 3 1-27 27 0.111111111111
106 input1.bam FBtr0080646 72 72 F 0 72-72 1 0.0 106 input1.bam FBtr0080646 72 72 F 0 72-72 1 0.0
107 input1.bam FBtr0080647 72 6 F 10 1-12 12 0.833333333333 107 input1.bam FBtr0080647 72 6 F 10 1-27 27 0.37037037037
108 input1.bam FBtr0080647 72 72 F 0 72-72 1 0.0 108 input1.bam FBtr0080647 72 72 F 0 72-72 1 0.0
109 input1.bam FBtr0080660 72 4 F 7 1-7 7 1.0 109 input1.bam FBtr0080660 72 4 F 7 1-27 27 0.259259259259
110 input1.bam FBtr0080660 72 72 F 0 72-72 1 0.0 110 input1.bam FBtr0080660 72 72 F 0 72-72 1 0.0
111 input1.bam FBtr0080663 71 9 F 102 1-17 17 6.0 111 input1.bam FBtr0080663 71 9 F 102 1-34 34 3.0
112 input1.bam FBtr0080663 71 26 F 1 26-26 1 1.0 112 input1.bam FBtr0080663 71 26 F 1 26-43 18 0.0555555555556
113 input1.bam FBtr0080663 71 32 F 2 32-32 1 2.0 113 input1.bam FBtr0080663 71 32 F 2 32-47 16 0.125
114 input1.bam FBtr0080663 71 50 F 10 50-51 2 5.0 114 input1.bam FBtr0080663 71 50 F 10 50-70 21 0.47619047619
115 input1.bam FBtr0080663 71 71 F 0 71-71 1 0.0 115 input1.bam FBtr0080663 71 71 F 0 71-71 1 0.0
116 input1.bam FBtr0080664 71 11 F 108 1-21 21 5.14285714286 116 input1.bam FBtr0080664 71 11 F 108 1-35 35 3.08571428571
117 input1.bam FBtr0080664 71 33 F 9 28-38 11 0.818181818182 117 input1.bam FBtr0080664 71 33 F 9 28-52 25 0.36
118 input1.bam FBtr0080664 71 53 F 11 50-56 7 1.57142857143 118 input1.bam FBtr0080664 71 53 F 11 50-71 22 0.5
119 input1.bam FBtr0080664 71 71 F 0 71-71 1 0.0 119 input1.bam FBtr0080664 71 71 F 0 71-71 1 0.0