Mercurial > repos > artbio > small_rna_maps

diff small_rna_maps.xml @ 3:ed8b0142538d draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/small_rna_maps commit 7b2ceb05489c27ddb769c38fdec56274108a6fa1
author artbio
date Tue, 22 Aug 2017 12:05:47 -0400
parents 507383cce5a8
children a6b9a081064b
line wrap: on
line diff
--- a/small_rna_maps.xml	Mon Aug 14 05:52:34 2017 -0400
+++ b/small_rna_maps.xml	Tue Aug 22 12:05:47 2017 -0400
@@ -1,4 +1,4 @@
-<tool id="small_rna_maps" name="small_rna_maps" version="1.0.0">
+<tool id="small_rna_maps" name="small_rna_maps" version="1.0.1">
   <description></description>
   <requirements>
         <requirement type="package" version="1.11.2=py27_0">numpy</requirement>
@@ -23,8 +23,8 @@
       #for $sample in $inputs
           '$sample.name'
       #end for
-          --plot_methods Counts $extra_plot
-          --outputs $output_tab $extra_output_tab &&
+          --plot_methods Counts '$extra_plot'
+          --outputs '$output_tab' '$extra_output_tab' &&
       Rscript '$__tool_directory__'/small_rna_maps.r
           --first_dataframe '$output_tab' 
           --extra_dataframe '$extra_output_tab'