Mercurial > repos > astroteam > sgwb_astro_tool

annotate Model_spectrum.py @ 0:c9fc89ee996e draft default tip

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planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
author astroteam
date Wed, 17 Apr 2024 10:29:23 +0000
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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1 #!/usr/bin/env python
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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2 # coding: utf-8
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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4 # flake8: noqa
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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6 import json
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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7 import os
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8 import shutil
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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10 from oda_api.json import CustomJSONEncoder
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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12 get_ipython().run_cell_magic( # noqa: F821
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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13 "bash",
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14 "",
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15 "wget https://gitlab.renkulab.io/astronomy/mmoda/sgwb/-/raw/master/EPTA.csv\nwget https://gitlab.renkulab.io/astronomy/mmoda/sgwb/-/raw/master/NANOGrav23.csv\nwget https://gitlab.renkulab.io/astronomy/mmoda/sgwb/-/raw/master/PPTA.csv\n",
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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16 )
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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18 import matplotlib.pyplot as plt
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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20 # Loading necessary packages
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21 import numpy as np
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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23 get_ipython().run_line_magic("matplotlib", "inline") # noqa: F821
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24 import astropy.constants as const
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25 import astropy.units as u
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26 from astropy.constants import c
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27 from numpy import log, pi, sqrt
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28 from oda_api.data_products import ODAAstropyTable, PictureProduct
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30 # Parameters of the phase transition
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31 # Temperature in GeV
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32 T_star = 0.178 # http://odahub.io/ontology#Energy_GeV
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34 # Numbers of relativistic degrees of freedom
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35 g_star = 20 # http://odahub.io/ontology#Integer
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37 # ratio of the energy density deposited in the bubbles to the radiation energy density
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38 alpha = 1.0 # http://odahub.io/ontology#Float
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c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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40 # beta/H : rate of the phase transition compared to Hubble rate
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41 beta_H = 3.3
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43 # fraction of turbulent energy that goes to gw N.B. arXiv:1004.4187 claims that epsilon_turb=0.05, but checks below show that it is rather 0.01
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44 epsilon_turb = 1 # http://odahub.io/ontology#Float
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46 # terminal velocity of bubbles
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47 v_w = 0.999 # http://odahub.io/ontology#Float
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48 h = 0.7 # http://odahub.io/ontology#Float
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50 # Parameterisation='RoperPol2023' # http://odahub.io/ontology#String ; oda:allowed_value "Lewicki2022","RoperPol2023"
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52 _galaxy_wd = os.getcwd()
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53
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54 with open("inputs.json", "r") as fd:
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55 inp_dic = json.load(fd)
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56 if "_data_product" in inp_dic.keys():
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57 inp_pdic = inp_dic["_data_product"]
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58 else:
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59 inp_pdic = inp_dic
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61 for vn, vv in inp_pdic.items():
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62 if vn != "_selector":
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63 globals()[vn] = type(globals()[vn])(vv)
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64
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65 c_s = 3 ** (-0.5) # speed of sound
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66 F0_GW = 1.64e-5 / h**2 * (100 / g_star) ** (1 / 3.0)
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67
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68 # Eq.20 of arXiv:1512.06239, corrected according to Appendix A of arXiv:1004.4187
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69
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70 def ka_v(alpha_v, v):
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71 zeta = ((2.0 / 3.0 * alpha_v + alpha_v**2) ** 0.5 + (1 / 3.0) ** 0.5) / (
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72 1 + alpha_v
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73 )
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74 kappa_a = (
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75 6.9
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76 * v ** (6.0 / 5.0)
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77 * alpha_v
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78 / (1.36 - 0.037 * alpha_v**0.5 + alpha_v)
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79 )
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80 kappa_b = alpha_v ** (2.0 / 5.0) / (
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81 0.017 + (0.997 + alpha_v) ** (2.0 / 5.0)
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82 )
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83 kappa_c = alpha_v**0.5 / (0.135 + (0.98 + alpha_v) ** 0.5)
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84 kappa_d = alpha_v / (0.73 + 0.083 * alpha_v**0.6 + alpha_v)
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85 deltak = -0.9 * log(alpha_v**0.5 / (1 + alpha_v**0.5))
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86 if v < c_s:
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87 return (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
88 c_s ** (11.0 / 5.0)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
89 * kappa_a
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
90 * kappa_b
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
91 / (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
92 (c_s ** (11.0 / 5.0) - v ** (11.0 / 5.0)) * kappa_b
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
93 + v * c_s ** (6.0 / 5.0) * kappa_a
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
94 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
95 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
96 elif v > zeta:
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
97 return (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
98 (zeta - 1) ** 3
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
99 * (zeta / v) ** (5.0 / 2)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
100 * kappa_c
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
101 * kappa_d
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
102 / (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
103 ((zeta - 1) ** 3 - (v - 1) ** 3)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
104 * zeta ** (5.0 / 2.0)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
105 * kappa_c
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
106 + (v - 1) ** 3 * kappa_d
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
107 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
108 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
109 else:
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
110 return (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
111 kappa_b
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
112 + (v - c_s) * deltak
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
113 + (v - c_s) ** 3
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
114 / (zeta - c_s) ** 3
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
115 * (kappa_c - kappa_b - (zeta - c_s) * deltak)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
116 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
117
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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118 kappa_v = ka_v(alpha, v_w)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
119 kappa_therm = 1 - kappa_v
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
120 print(
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
121 "Fraction of released energy in bulk motion:",
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
122 kappa_v,
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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123 ", Thermal energy fraction:",
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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124 kappa_therm,
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
125 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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126 Omega_star = (kappa_v) * alpha / (1 + alpha)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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127 print("Omega in bulk motion:", Omega_star)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
128
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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129 # Comoving Hubble rate at the phase transition Eq. 11 of arXiv:1512.06239
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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130 def H_star(T_star):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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diff changeset
131 return (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
132 16.5e-6
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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133 * (T_star / (100.0 * u.GeV))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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134 * (g_star / 100) ** (1.0 / 6.0)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
135 * u.Hz
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
136 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
137
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
138 Hstar = H_star(T_star * u.GeV)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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139 logHstar = np.log10(Hstar / u.Hz)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
140
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
141 fmin = logHstar.value - 5
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
142 fmax = logHstar.value + 5
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
143 ff = np.logspace(fmin, fmax, 101)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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diff changeset
144
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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145 # HL model formula
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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146 def GW_sound(f, T_star, alpha, beta_H, v_w):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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147 kappa_v = ka_v(alpha, v_w)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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148 K = kappa_v * alpha / (1 + alpha)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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149 lambda_star = (8 * pi) ** (1 / 3) * max([v_w, c_s]) / (beta_H * Hstar) * c
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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150 Delta_w = sqrt((v_w - c_s) ** 2) / v_w
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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151 s2 = Delta_w * lambda_star * f / c
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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152 print((c / lambda_star).cgs, (c / (Delta_w * lambda_star)).cgs)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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153 s1 = lambda_star * f / c
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
154 M = (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
155 16
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
156 * (1 + Delta_w ** (-3)) ** (2 / 3.0)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
157 * (Delta_w * s1) ** 3
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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158 / ((1 + s1**3) ** (2.0 / 3.0) * (3 + s2**2) ** 2)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
159 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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160 factor = (K * lambda_star * Hstar) ** 2 / (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
161 sqrt(K) + lambda_star * Hstar / c
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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162 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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diff changeset
163 mu = 4.78 - 6.27 * Delta_w + 3.34 * Delta_w**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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164 ff = f / u.Hz
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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165 dlnf = (ff[1] - ff[0]) / ff[0]
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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166 mu = sum(M) * dlnf
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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167 B = 1e-2 / mu
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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168 return (3 * B * factor / c**2 * F0_GW * M).cgs
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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169
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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170 # Eq 1 of the new Overleaf, from Alberto
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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171
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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172 def GW_turb_Theo(f, T_star, alpha, beta_H, v_w, epsilon_turb):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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173 (const.c / H_star(T_star)).to(u.Mpc)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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174 kappa_v = ka_v(alpha, v_w)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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175 Omega_star = (kappa_v) * alpha / (1 + alpha)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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176 lambda_star = (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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177 (8 * pi) ** (1 / 3) * max([v_w, c_s]) / (beta_H * H_star(T_star))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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178 ) * c # characteristic light-crossing distance scale
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179
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180 Delta_w = (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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181 sqrt((v_w - c_s) ** 2) / v_w
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182 ) # <1, the width of the bubble wall in units of R_star
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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183 R_peak = (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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184 Delta_w * lambda_star
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185 ) # the GW spectrum peaks ad the frequency correspoding to the bubble wall width
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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186 u_star = sqrt(0.75 * epsilon_turb * Omega_star) # alfven velocity
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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187 dt_fin = 2 * lambda_star / u_star / c # eddy processing time
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188
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189 T_GW = np.log10(1 + (H_star(T_star) * dt_fin / (2 * pi))) * (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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190 f < 1 / dt_fin
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191 ) + np.log10(1 + (H_star(T_star) / (2 * pi * f))) * (f >= 1 / dt_fin)
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192 T_GW = T_GW**2
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193 alpha_pi = 2.15
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194 P_pi = (1 + ((lambda_star * f) / (2.2 * c)) ** alpha_pi) ** (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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195 -11 / (3 * alpha_pi)
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196 )
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197 M = (
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198 (lambda_star * f / c) ** 3
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199 * (4 * pi**2 * T_GW * P_pi)
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200 / (0.84 * (lambda_star * H_star(T_star) / c) ** 2)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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201 )
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202 res = (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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203 3
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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204 * (1.75 * 10 ** (-3))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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205 * (Omega_star * epsilon_turb) ** 2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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206 * (lambda_star * H_star(T_star) / c) ** 2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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207 * 1.64
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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208 * 10 ** (-5)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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209 * (100 / g_star) ** (1 / 3.0)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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210 / h**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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211 )
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212 return res * M
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213
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214 def GW_turb_Andrii(f, T_star, alpha, beta_H, v_w, epsilon_turb):
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215
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216 # Eq. 1 of 2307.10744
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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217 lambda_star = (
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218 (8 * pi) ** (1 / 3) * max([v_w, c_s]) / (beta_H * Hstar)
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219 ) * c # characteristic light-crossing distance scale
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220
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221 kappa_v = ka_v(alpha, v_w)
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222 K = kappa_v * alpha / (1 + alpha)
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223
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224 # Eq. 10 of 2307.10744
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225 Omega_star = epsilon_turb * K
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226
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227 # Eq. 13 of 2307.10744 and text after it
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228 u_star = sqrt(0.75 * Omega_star)
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229 dt_fin = 2 * lambda_star / u_star / c
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230 s3 = dt_fin * f
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231 s1 = f * lambda_star / c
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232 print("u_star=", u_star, "lambda_star=", lambda_star.cgs)
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233
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234 # Eq. 15 of 2307.10744
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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235 T_GW = np.log(1 + Hstar * dt_fin / (2 * pi)) * (s3 < 1) + np.log(
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236 1 + lambda_star * Hstar / c / (2 * pi * s1)
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237 ) * (s3 >= 1)
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238 T_GW = T_GW**2
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239
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240 # Eq. 17 of 2307.10744
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241 alpha_pi = 2.15
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242 s_pi = 2.2
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243 P_pi = (1 + (s1 / s_pi) ** alpha_pi) ** (-11 / (3 * alpha_pi))
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244
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245 # Eq 18,19,20 of 2307.10744
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246 A = 2e-3 * 1.4 * 0.6
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247
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248 # Eq. 14 of 2307.10744
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249 Sturb = (
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250 4
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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251 * pi**2
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252 * s1**3
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253 * T_GW
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254 / (lambda_star * Hstar / c) ** 2
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255 * P_pi
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256 / 1.4
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257 / 0.6
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258 )
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259
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260 # Eq 9 of 2307.10744
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261 res = (
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262 3 * A * Omega_star**2 * (lambda_star * Hstar / c) ** 2 * F0_GW * Sturb
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263 )
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264 return res
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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265
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266 # Eq 19 of 2308.08546
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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267 def GW_Ellis(f, T_star, alpha, beta_H, v_w, epsilon_turb):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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268 A = 5.1e-2
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269 a = 2.4
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270 b = 2.4
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271 c = 4.0
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272 Hstar = H_star(T_star).cgs
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273 f_H = Hstar / 2 / pi
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274 fp = 0.7 * beta_H * f_H
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275 lambda_star = (2 * pi * 3e10 * u.cm / u.s / fp).cgs
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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276
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277 SH = 1 / (1 + (f / f_H) ** (a - 3))
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278 Omega_star = beta_H ** (-2) * alpha / (1 + alpha) * A
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279 Omega_B = epsilon_turb * Omega_star / 2.0
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280 Omega_gamma = 2 / g_star
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281 B = 3e-6 * (Omega_B / Omega_gamma) ** 0.5
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282 res = (
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283 beta_H ** (-2)
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284 * alpha
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285 / (1 + alpha)
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286 * A
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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287 * (a + b) ** c
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288 / (b * (f / fp) ** (-a / c) + a * (f / fp) ** (b / c)) ** c
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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289 * SH
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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290 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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291 return (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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292 1.6e-5 * (g_star / 100) ** (-1 / 3.0) * res / h**2,
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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293 lambda_star.cgs.value,
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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294 B,
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295 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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296
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297 d = np.genfromtxt("NANOGrav23.csv")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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298 gammas_nano = d[:, 0]
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299 As_nano = 10 ** d[:, 1]
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300 ps_nano = 5 - gammas_nano
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301
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302 d = np.genfromtxt("EPTA.csv")
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303 gammas_epta = d[:, 0]
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304 As_epta = 10 ** d[:, 1]
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305 ps_epta = 5 - gammas_epta
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306
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307 d = np.genfromtxt("PPTA.csv")
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308 gammas_ppta = d[:, 0]
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309 As_ppta = 10 ** d[:, 1]
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310 ps_ppta = 5 - gammas_ppta
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311
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312 H0 = 70 * (u.km / u.s) / u.Mpc
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313
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314 GW_t = GW_turb_Theo(
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315 ff * u.Hz, T_star * u.GeV, alpha, beta_H, v_w, epsilon_turb
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316 )
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317 # plt.plot(ff,GW_t,color='magenta')
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318 GW_t = GW_turb_Andrii(
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319 ff * u.Hz, T_star * u.GeV, alpha, beta_H, v_w, epsilon_turb
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320 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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321 GW_s = GW_sound(ff * u.Hz, T_star * u.GeV, alpha, beta_H, v_w)
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322 GW = GW_s + GW_t
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323
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324 GW1 = GW_Ellis(ff * u.Hz, T_star * u.GeV, alpha, beta_H, v_w, epsilon_turb)[0]
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325
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326 # if(Parameterisation=='Lewicki2022'):
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327 # plt.plot(ff,GW1,color='magenta',alpha=0.5,linewidth=4,label='2208.11697')
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328 # else:
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329 plt.plot(ff, GW_t, color="blue", linestyle="dashed", label="turbulence")
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330 plt.plot(ff, GW_s, color="red", linestyle="dotted", label="sound waves")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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331 plt.plot(ff, GW, linewidth=4, color="black", alpha=0.5, label="total")
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332
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333 fref = (1 / u.yr).cgs.value
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334 lgfmin = np.log10(fref / 10.0)
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335 lgfmax = np.log10(fref / 2.0)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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336 fff = np.logspace(lgfmin, lgfmax, 10) * u.Hz
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337 min_nano = np.ones(len(fff))
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338 max_nano = np.zeros(len(fff))
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339 for i in range(len(As_nano)):
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340 spec = (
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341 2
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342 * pi**2
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343 / 3
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344 / H0**2
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345 * fff**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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346 * As_nano[i] ** 2
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347 * (fff / fref) ** (3 - gammas_nano[i])
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348 ).cgs.value
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349 min_nano = np.minimum(spec, min_nano)
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350 max_nano = np.maximum(spec, max_nano)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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351 # plt.plot(ff,spec)
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352 plt.fill_between(
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353 fff.value, min_nano, max_nano, color="red", alpha=0.5, label="NANOGrav"
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
354 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
355 min_epta = np.ones(len(fff))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
356 max_epta = np.zeros(len(fff))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
357 for i in range(len(As_epta)):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
358 spec = (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
359 2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
360 * pi**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
361 / 3
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
362 / H0**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
363 * fff**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
364 * As_epta[i] ** 2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
365 * (fff / fref) ** (3 - gammas_epta[i])
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
366 ).cgs.value
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
367 min_epta = np.minimum(spec, min_epta)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
368 max_epta = np.maximum(spec, max_epta)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
369 # plt.plot(ff,spec)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
370 plt.fill_between(
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
371 fff.value, min_epta, max_epta, color="blue", alpha=0.5, label="EPTA"
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
372 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
373 min_ppta = np.ones(len(fff))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
374 max_ppta = np.zeros(len(fff))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
375 for i in range(len(As_ppta)):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
376 spec = (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
377 2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
378 * pi**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
379 / 3
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
380 / H0**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
381 * fff**2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
382 * As_ppta[i] ** 2
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
383 * (fff / fref) ** (3 - gammas_ppta[i])
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
384 ).cgs.value
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
385 min_ppta = np.minimum(spec, min_ppta)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
386 max_ppta = np.maximum(spec, max_ppta)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
387 # plt.plot(ff,spec)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
388 plt.fill_between(
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
389 fff.value, min_ppta, max_ppta, color="green", alpha=0.5, label="PPTA"
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
390 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
391
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
392 maxGW = max(GW)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
393 ind = np.argmax(GW)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
394 fmax = ff[ind]
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
395 plt.xscale("log")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
396 plt.yscale("log")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
397 plt.ylim(maxGW / 1e5, maxGW * 10)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
398 plt.xlim(fmax / 1e3, fmax * 1e3)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
399 plt.grid()
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
400 plt.xscale("log")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
401 plt.yscale("log")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
402 plt.legend(loc="upper left")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
403 plt.xlabel("$f$, Hz")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
404 plt.ylabel("$\Omega_{gw}(f)$")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
405 plt.savefig("Spectrum.png", format="png", bbox_inches="tight")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
406
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
407 bin_image = PictureProduct.from_file("Spectrum.png")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
408 from astropy.table import Table
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
409
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
410 # if(Parameterisation=='Lewicki2022'):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
411 # data=[ff,GW1]
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
412 # names=('f[Hz]','Omega_gw')
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
413 # else:
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
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diff changeset
414 data = [ff, GW_s, GW_t]
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
415 names = ("f[Hz]", "Omega_sound_waves", "Omega_turbulence")
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
416 spectrum = ODAAstropyTable(Table(data, names=names))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
417
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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diff changeset
418 png = bin_image # http://odahub.io/ontology#ODAPictureProduct
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
419 astropy_table = spectrum # http://odahub.io/ontology#ODAAstropyTable
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
420
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
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diff changeset
421 # output gathering
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
422 _galaxy_meta_data = {}
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
423 _oda_outs = []
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
424 _oda_outs.append(("out_Model_spectrum_png", "png_galaxy.output", png))
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
425 _oda_outs.append(
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
426 (
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
427 "out_Model_spectrum_astropy_table",
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
428 "astropy_table_galaxy.output",
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
429 astropy_table,
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
430 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
431 )
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
432
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
433 for _outn, _outfn, _outv in _oda_outs:
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
434 _galaxy_outfile_name = os.path.join(_galaxy_wd, _outfn)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
435 if isinstance(_outv, str) and os.path.isfile(_outv):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
436 shutil.move(_outv, _galaxy_outfile_name)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
437 _galaxy_meta_data[_outn] = {"ext": "_sniff_"}
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
438 elif getattr(_outv, "write_fits_file", None):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
439 _outv.write_fits_file(_galaxy_outfile_name)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
440 _galaxy_meta_data[_outn] = {"ext": "fits"}
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
441 elif getattr(_outv, "write_file", None):
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
442 _outv.write_file(_galaxy_outfile_name)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
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443 _galaxy_meta_data[_outn] = {"ext": "_sniff_"}
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
444 else:
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
445 with open(_galaxy_outfile_name, "w") as fd:
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
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446 json.dump(_outv, fd, cls=CustomJSONEncoder)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
447 _galaxy_meta_data[_outn] = {"ext": "json"}
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
448
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
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449 with open(os.path.join(_galaxy_wd, "galaxy.json"), "w") as fd:
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
diff changeset
450 json.dump(_galaxy_meta_data, fd)
c9fc89ee996e planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools commit d5be3628a0bdad9747451669fa195f1d2acaf3f2
astroteam
parents:
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451 print("*** Job finished successfully ***")