Mercurial > repos > audreysackey > gff2bed
diff gff2bed.xml @ 0:fa40c647dc35 draft default tip
Uploaded
author | audreysackey |
---|---|
date | Fri, 10 Dec 2021 23:16:51 +0000 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/gff2bed.xml Fri Dec 10 23:16:51 2021 +0000 @@ -0,0 +1,34 @@ +<tool id="bed2gff" name="Converts file extension from bed to gff" version="2.0.2"> +<description>from one extension to another</description> +<requirements> + <requirement type="package" version="11.0.11">openjdk</requirement> +</requirements> +<command> +<![CDATA[ + +java -jar $__tool_directory__/ScriptManager-v0.13-dev.jar coordinate-manipulation bed-to-gff '${input}' -o '${output}' 2>&1 +]]> +</command> +<inputs> + <param name="input" type="data" format="bed" label="input file in bed format"/> + </inputs> +<outputs> + <data name="output" type="data" format="gff" label="output file in gff format"/> +</outputs> +<help> +**What it does** + +This tool converts a file extension from bed to gff + +----- +**Example** + +Input File:: +input_file.bed + +Converting to gff returns this:: +output_file.gff + + + </help> +</tool>