Mercurial > repos > avowinkel > picard

diff test-data/picard_QualityScoreDistribution_test1.tab @ 0:5166ed57b1c4 draft
Uploaded version 1.135
author: avowinkel
date: Mon, 06 Jul 2015 14:46:32 -0400
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/picard_QualityScoreDistribution_test1.tab	Mon Jul 06 14:46:32 2015 -0400
@@ -0,0 +1,44 @@
+## htsjdk.samtools.metrics.StringHeader
+# picard.analysis.QualityScoreDistribution CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_968.dat ALIGNED_READS_ONLY=false PF_READS_ONLY=false INCLUDE_NO_CALLS=false INPUT=/Users/anton/galaxy-central/database/files/000/dataset_966.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_967.dat REFERENCE_SEQUENCE=localref.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT    STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
+## htsjdk.samtools.metrics.StringHeader
+# Started on: Wed Oct 15 14:31:45 EDT 2014
+
+
+## HISTOGRAM	java.lang.Byte
+QUALITY	COUNT_OF_Q
+6	704
+7	2044
+8	745
+9	2761
+10	1193
+11	723
+12	1766
+13	1467
+14	1400
+15	1463
+16	478
+17	831
+18	330
+19	904
+20	1538
+21	2953
+22	565
+23	4270
+24	1496
+25	5178
+26	3992
+27	3779
+28	3074
+29	2909
+30	19446
+31	3520
+32	13368
+33	9203
+34	22271
+35	24655
+36	64306
+37	38212
+38	95777
+39	67370
+40	36926
+